Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | ACH6FQ_RS05620 | Genome accession | NZ_CP172383 |
| Coordinates | 1091023..1091982 (+) | Length | 319 a.a. |
| NCBI ID | WP_002871702.1 | Uniprot ID | A0A5T0XJ57 |
| Organism | Campylobacter jejuni strain YH004 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1086023..1096982
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FQ_RS05590 (ACH6FQ_05590) | neuC | 1086617..1087741 (+) | 1125 | WP_002871707.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| ACH6FQ_RS05595 (ACH6FQ_05595) | - | 1087734..1088351 (+) | 618 | WP_019260375.1 | glycosyltransferase | - |
| ACH6FQ_RS05600 (ACH6FQ_05600) | - | 1088348..1088680 (+) | 333 | WP_019260376.1 | hypothetical protein | - |
| ACH6FQ_RS05605 (ACH6FQ_05605) | - | 1088677..1089342 (+) | 666 | WP_002871705.1 | cytidylyltransferase domain-containing protein | - |
| ACH6FQ_RS05610 (ACH6FQ_05610) | - | 1089330..1090160 (+) | 831 | WP_002906695.1 | CatB-related O-acetyltransferase | - |
| ACH6FQ_RS05615 (ACH6FQ_05615) | waaV | 1090152..1090964 (-) | 813 | WP_002871703.1 | glycosyltransferase family 2 protein | - |
| ACH6FQ_RS05620 (ACH6FQ_05620) | waaF | 1091023..1091982 (+) | 960 | WP_002871702.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| ACH6FQ_RS05625 (ACH6FQ_05625) | gmhA | 1091963..1092523 (-) | 561 | WP_002787744.1 | D-sedoheptulose 7-phosphate isomerase | - |
| ACH6FQ_RS05630 (ACH6FQ_05630) | rfaE1 | 1092520..1093905 (-) | 1386 | WP_395766116.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| ACH6FQ_RS05635 (ACH6FQ_05635) | rfaD | 1093898..1094851 (-) | 954 | WP_002871699.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| ACH6FQ_RS05640 (ACH6FQ_05640) | gmhB | 1094852..1095413 (-) | 562 | Protein_1090 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| ACH6FQ_RS05645 (ACH6FQ_05645) | - | 1095494..1095796 (+) | 303 | WP_002852762.1 | cytochrome c | - |
| ACH6FQ_RS05650 (ACH6FQ_05650) | ccoS | 1095819..1096025 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 36703.22 Da Isoelectric Point: 10.3737
>NTDB_id=1067110 ACH6FQ_RS05620 WP_002871702.1 1091023..1091982(+) (waaF) [Campylobacter jejuni strain YH004]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGSTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGSTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL
Nucleotide
Download Length: 960 bp
>NTDB_id=1067110 ACH6FQ_RS05620 WP_002871702.1 1091023..1091982(+) (waaF) [Campylobacter jejuni strain YH004]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGGTAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCTCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGGTAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCTCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.357 |
100 |
0.944 |