Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FQ_RS05270 | Genome accession | NZ_CP172383 |
| Coordinates | 1021937..1022239 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain YH004 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1016937..1027239
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FQ_RS05245 (ACH6FQ_05245) | rpsR | 1017299..1017559 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FQ_RS05250 (ACH6FQ_05250) | lon | 1017620..1019995 (-) | 2376 | WP_002878791.1 | endopeptidase La | - |
| ACH6FQ_RS05255 (ACH6FQ_05255) | - | 1020012..1020659 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| ACH6FQ_RS05260 (ACH6FQ_05260) | fliW | 1020820..1021209 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FQ_RS05265 (ACH6FQ_05265) | proC | 1021209..1021940 (+) | 732 | WP_002868635.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FQ_RS05270 (ACH6FQ_05270) | ctsT | 1021937..1022239 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| ACH6FQ_RS05275 (ACH6FQ_05275) | - | 1022236..1022898 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| ACH6FQ_RS05280 (ACH6FQ_05280) | - | 1022895..1023347 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| ACH6FQ_RS05285 (ACH6FQ_05285) | hemD | 1023344..1023973 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| ACH6FQ_RS05290 (ACH6FQ_05290) | thiE | 1023951..1024583 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| ACH6FQ_RS05295 (ACH6FQ_05295) | thiD | 1024573..1025385 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FQ_RS05300 (ACH6FQ_05300) | - | 1025382..1026068 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| ACH6FQ_RS05305 (ACH6FQ_05305) | - | 1026065..1026826 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1067108 ACH6FQ_RS05270 WP_002853046.1 1021937..1022239(+) (ctsT) [Campylobacter jejuni strain YH004]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1067108 ACH6FQ_RS05270 WP_002853046.1 1021937..1022239(+) (ctsT) [Campylobacter jejuni strain YH004]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |