Detailed information NTG1067082

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6FY_RS05950
• Genome accession: NZ_CP172382
• Coordinates: 1123490..1124449 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain YH006
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1118490..1129449

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6FY_RS05920 (ACH6FY_05920)	neuC	1119057..1120172 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
ACH6FY_RS05925 (ACH6FY_05925)	-	1120169..1120747 (+)	579	WP_395766337.1	hypothetical protein	-
ACH6FY_RS05930 (ACH6FY_05930)	-	1120762..1121082 (+)	321	Protein_1148	beta-1,4-N-acetylgalactosaminyltransferase	-
ACH6FY_RS05935 (ACH6FY_05935)	-	1121116..1121778 (+)	663	WP_002881429.1	cytidylyltransferase domain-containing protein	-
ACH6FY_RS05940 (ACH6FY_05940)	-	1121773..1122623 (-)	851	Protein_1150	glycosyltransferase	-
ACH6FY_RS05945 (ACH6FY_05945)	waaV	1122607..1123431 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
ACH6FY_RS05950 (ACH6FY_05950)	waaF	1123490..1124449 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6FY_RS05955 (ACH6FY_05955)	gmhA	1124430..1124990 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6FY_RS05960 (ACH6FY_05960)	rfaE1	1124987..1126372 (-)	1386	WP_014516805.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6FY_RS05965 (ACH6FY_05965)	rfaD	1126365..1127318 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6FY_RS05970 (ACH6FY_05970)	gmhB	1127319..1127879 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
ACH6FY_RS05975 (ACH6FY_05975)	-	1127961..1128263 (+)	303	WP_002852762.1	cytochrome c	-
ACH6FY_RS05980 (ACH6FY_05980)	ccoS	1128286..1128492 (-)	207	WP_002875422.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=1067082 ACH6FY_RS05950 WP_002875425.1 1123490..1124449(+) (waaF) [Campylobacter jejuni strain YH006]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=1067082 ACH6FY_RS05950 WP_002875425.1 1123490..1124449(+) (waaF) [Campylobacter jejuni strain YH006]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1