Detailed information NTG1067054

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6FG_RS05625
• Genome accession: NZ_CP172381
• Coordinates: 1091056..1092015 (+)
• Length: 319 a.a.
• NCBI ID: WP_002871702.1
• Uniprot ID: A0A5T0XJ57
• Organism: Campylobacter jejuni strain YH007
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1086056..1097015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6FG_RS05595 (ACH6FG_05595)	neuC	1086648..1087772 (+)	1125	WP_002871707.1	UDP-N-acetylglucosamine 2-epimerase	-
ACH6FG_RS05600 (ACH6FG_05600)	-	1087765..1088712 (+)	948	WP_002896736.1	glycosyltransferase	-
ACH6FG_RS05605 (ACH6FG_05605)	-	1088709..1089374 (+)	666	WP_002871705.1	cytidylyltransferase domain-containing protein	-
ACH6FG_RS05610 (ACH6FG_05610)	-	1089362..1089556 (+)	195	WP_223209788.1	hypothetical protein	-
ACH6FG_RS05615 (ACH6FG_05615)	-	1089519..1090193 (+)	675	WP_251824462.1	CatB-related O-acetyltransferase	-
ACH6FG_RS05620 (ACH6FG_05620)	waaV	1090185..1090997 (-)	813	WP_002871703.1	glycosyltransferase family 2 protein	-
ACH6FG_RS05625 (ACH6FG_05625)	waaF	1091056..1092015 (+)	960	WP_002871702.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6FG_RS05630 (ACH6FG_05630)	gmhA	1091996..1092556 (-)	561	WP_002787744.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6FG_RS05635 (ACH6FG_05635)	rfaE1	1092553..1093938 (-)	1386	WP_395766116.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6FG_RS05640 (ACH6FG_05640)	rfaD	1093931..1094884 (-)	954	WP_002871699.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6FG_RS05645 (ACH6FG_05645)	gmhB	1094885..1095446 (-)	562	Protein_1091	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
ACH6FG_RS05650 (ACH6FG_05650)	-	1095527..1095829 (+)	303	WP_002852762.1	cytochrome c	-
ACH6FG_RS05655 (ACH6FG_05655)	ccoS	1095852..1096058 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36703.22 Da
• Isoelectric Point: 10.3737

>NTDB_id=1067054 ACH6FG_RS05625 WP_002871702.1 1091056..1092015(+) (waaF) [Campylobacter jejuni strain YH007]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGSTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=1067054 ACH6FG_RS05625 WP_002871702.1 1091056..1092015(+) (waaF) [Campylobacter jejuni strain YH007]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGGTAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCTCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (97-294)

3D structure

• AlphaFold DB: A0A5T0XJ57

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.357	100	0.944