Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EN73_RS05410 Genome accession   NZ_CP007632
Coordinates   1054198..1055931 (-) Length   577 a.a.
NCBI ID   WP_000647646.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain NGBS572     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1049198..1060931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EN73_RS05380 (EN73_05500) - 1049265..1050101 (-) 837 WP_000455160.1 lipoate--protein ligase family protein -
  EN73_RS05385 (EN73_05505) coaB 1050255..1050938 (+) 684 WP_001873872.1 phosphopantothenate--cysteine ligase -
  EN73_RS05390 (EN73_05510) coaC 1050935..1051477 (+) 543 WP_000595816.1 phosphopantothenoylcysteine decarboxylase -
  EN73_RS05395 (EN73_05515) - 1051523..1052095 (+) 573 WP_000728786.1 ECF transporter S component -
  EN73_RS05400 (EN73_05520) - 1052205..1053923 (+) 1719 WP_000222549.1 phospho-sugar mutase -
  EN73_RS05405 (EN73_05525) - 1053987..1054184 (-) 198 WP_000746856.1 hypothetical protein -
  EN73_RS05410 (EN73_05530) rcrQ 1054198..1055931 (-) 1734 WP_000647646.1 ABC transporter ATP-binding protein Regulator
  EN73_RS05415 (EN73_05535) - 1055932..1057653 (-) 1722 WP_000826935.1 ABC transporter ATP-binding protein -
  EN73_RS05420 (EN73_05540) - 1057665..1058267 (-) 603 WP_000472259.1 lysozyme family protein -
  EN73_RS05425 (EN73_05545) - 1058269..1059246 (-) 978 WP_000968656.1 nucleoid-associated protein -
  EN73_RS05430 (EN73_05550) glyA 1059251..1060507 (-) 1257 WP_000575539.1 serine hydroxymethyltransferase -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 64223.94 Da        Isoelectric Point: 8.2055

>NTDB_id=106705 EN73_RS05410 WP_000647646.1 1054198..1055931(-) (rcrQ) [Streptococcus agalactiae strain NGBS572]
MKASHPKKIQKKLVQDLLSKKSLVGMALLGTVVQVCLTVYLPVLIGQAVDVVLSPHSMILLLPIMWKMVAVILANTIIQW
INPLLYNRLIFHYVASLRKAVMEKLNLLPIAYLDKRGIGDLISRVTTDTEQLSNGLLMVFNQFFVGLLTILVTIFSMAKI
DLLMLFLVLFLTPLSLFLARFIAKKSYHLYQNQTASRGRQTQFIEEMVSQESLIQAFSAQEESSDHFRTINQEYANFSQS
AIFYSSTVNPSTRFINSLIYGFLAGIGALRIMSGAFSVGQLITFLNYVNQYTKPFNDISSVLSEMQSALACAERLYSILE
ESSPNITGTEKLDSSTVKGQIDFKNVIFGYNKSKPLLNGINLHIPAGAKVAIVGPTGAGKSTLINLLMRFYEVDGGNILL
DGKPITDYEPSQLRQEIGMVLQETWLKSATIHDNIAYANPKASREEVIEAAKAANADFFIKQLPNGYDTYLEDAGDSLSQ
GQCQLLTIARIFLKLPRILILDEATSSIDTRTEVLVQEAFQMLMKGRTSFIIAHRLSTIQTADIILVMVSGEIVEVGNHS
ELIAQKGIYYQMQNAQK

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=106705 EN73_RS05410 WP_000647646.1 1054198..1055931(-) (rcrQ) [Streptococcus agalactiae strain NGBS572]
ATGAAAGCAAGTCATCCTAAAAAGATACAAAAAAAGCTTGTTCAAGATCTTCTTTCTAAAAAAAGCTTAGTAGGAATGGC
ATTATTAGGGACGGTAGTACAAGTTTGCCTCACTGTTTATTTGCCTGTTCTAATTGGACAGGCGGTAGACGTTGTATTAT
CGCCTCATTCTATGATATTATTGTTACCTATAATGTGGAAGATGGTTGCAGTTATTTTAGCAAATACTATTATTCAATGG
ATTAATCCTCTGCTCTATAACCGCTTAATTTTTCATTATGTTGCTTCTTTAAGAAAGGCTGTAATGGAAAAGTTGAATCT
ATTACCTATAGCTTACCTTGATAAACGTGGCATAGGTGACTTGATTAGTCGTGTGACTACCGATACGGAGCAATTATCAA
ATGGTTTATTAATGGTTTTTAACCAGTTCTTTGTTGGTTTATTAACTATTCTAGTTACTATTTTTAGTATGGCAAAGATT
GATTTATTAATGCTTTTTTTGGTATTATTTCTGACGCCTTTATCACTCTTTCTAGCCCGCTTTATTGCTAAAAAGAGTTA
TCACTTATATCAAAATCAAACGGCATCACGAGGACGACAAACTCAATTCATTGAAGAGATGGTGAGTCAAGAAAGCCTTA
TTCAAGCATTCAGTGCGCAAGAAGAAAGTAGTGATCATTTTAGGACTATTAATCAAGAGTATGCTAACTTTTCTCAATCA
GCAATTTTTTATTCTTCAACTGTCAATCCATCAACCCGATTTATCAATAGTTTGATTTATGGCTTCTTAGCAGGGATTGG
TGCCCTTCGTATTATGTCAGGTGCTTTTAGTGTTGGTCAATTAATCACTTTCTTAAATTATGTCAATCAATATACTAAGC
CATTTAATGACATCTCTTCCGTCCTGTCTGAGATGCAAAGTGCTCTGGCTTGTGCAGAACGCCTTTACTCTATTTTAGAA
GAATCGTCACCAAATATAACAGGTACAGAAAAACTTGATTCATCAACGGTCAAAGGTCAAATCGATTTTAAAAACGTTAT
TTTTGGTTATAATAAATCAAAACCACTATTGAATGGTATTAATTTACACATTCCAGCAGGAGCTAAGGTCGCTATTGTAG
GACCAACAGGTGCTGGGAAGTCTACTTTAATCAATTTATTAATGCGTTTCTATGAAGTTGACGGGGGAAATATCCTTTTA
GATGGTAAGCCTATTACTGATTATGAGCCATCACAATTAAGGCAAGAAATTGGAATGGTATTACAAGAAACGTGGTTAAA
AAGTGCTACGATTCACGATAACATTGCATATGCCAATCCTAAAGCTAGCCGTGAAGAAGTGATAGAGGCTGCAAAAGCAG
CTAATGCAGATTTCTTTATCAAACAATTACCGAATGGATATGATACGTATTTAGAAGATGCTGGAGATTCGTTATCACAG
GGGCAATGTCAGCTATTGACAATTGCTCGTATTTTTCTTAAATTACCTAGAATATTGATATTAGATGAGGCGACATCGTC
TATAGATACTCGTACTGAAGTTCTTGTTCAAGAAGCATTCCAAATGTTGATGAAGGGGAGAACAAGCTTTATTATTGCAC
ATCGCTTATCTACCATTCAAACAGCAGATATTATTTTAGTTATGGTATCTGGTGAAATTGTAGAAGTGGGTAACCACTCT
GAATTAATAGCTCAAAAAGGTATTTATTATCAAATGCAAAATGCACAAAAGTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(357-506)

ABC transporter transmembrane region (ABC_membrane)

(25-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

36.814

97.92

0.36

Multiple sequence alignment