Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6E8_RS05830 | Genome accession | NZ_CP172380 |
| Coordinates | 1084626..1084928 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain YH008 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1079626..1089928
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6E8_RS05805 (ACH6E8_05805) | rpsR | 1079989..1080249 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6E8_RS05810 (ACH6E8_05810) | lon | 1080309..1082684 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| ACH6E8_RS05815 (ACH6E8_05815) | - | 1082701..1083348 (-) | 648 | WP_069358670.1 | outer membrane protein assembly factor BamD | - |
| ACH6E8_RS05820 (ACH6E8_05820) | fliW | 1083509..1083898 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6E8_RS05825 (ACH6E8_05825) | proC | 1083898..1084629 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6E8_RS05830 (ACH6E8_05830) | ctsT | 1084626..1084928 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| ACH6E8_RS05835 (ACH6E8_05835) | - | 1084925..1085587 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| ACH6E8_RS05840 (ACH6E8_05840) | - | 1085584..1086036 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| ACH6E8_RS05845 (ACH6E8_05845) | hemD | 1086033..1086662 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| ACH6E8_RS05850 (ACH6E8_05850) | thiE | 1086640..1087272 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| ACH6E8_RS05855 (ACH6E8_05855) | thiD | 1087262..1088074 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6E8_RS05860 (ACH6E8_05860) | - | 1088071..1088757 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| ACH6E8_RS05865 (ACH6E8_05865) | - | 1088754..1089515 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1067026 ACH6E8_RS05830 WP_002853046.1 1084626..1084928(+) (ctsT) [Campylobacter jejuni strain YH008]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1067026 ACH6E8_RS05830 WP_002853046.1 1084626..1084928(+) (ctsT) [Campylobacter jejuni strain YH008]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |