Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   ACH6FR_RS07260 Genome accession   NZ_CP172379
Coordinates   1387044..1388228 (-) Length   394 a.a.
NCBI ID   WP_002887977.1    Uniprot ID   A0A0S2CFQ6
Organism   Campylobacter jejuni strain YH013     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1382044..1393228
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH6FR_RS07235 (ACH6FR_07235) fliL 1383192..1383728 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  ACH6FR_RS07240 (ACH6FR_07240) acpS 1383728..1384075 (+) 348 WP_002825806.1 holo-ACP synthase -
  ACH6FR_RS07245 (ACH6FR_07245) - 1384076..1384495 (-) 420 WP_002780440.1 hypothetical protein -
  ACH6FR_RS07250 (ACH6FR_07250) - 1384492..1385853 (-) 1362 WP_002887974.1 cytochrome P450 -
  ACH6FR_RS07255 (ACH6FR_07255) - 1385850..1386971 (-) 1122 WP_052789886.1 hypothetical protein -
  ACH6FR_RS07260 (ACH6FR_07260) kpsS 1387044..1388228 (-) 1185 WP_002887977.1 capsule polysaccharide modification protein KpsS Regulator
  ACH6FR_RS07265 (ACH6FR_07265) kpsC 1388225..1390294 (-) 2070 WP_002887978.1 capsular polysaccharide biosynthesis protein -
  ACH6FR_RS07270 (ACH6FR_07270) cysC 1390291..1390803 (-) 513 WP_002818256.1 cytidine diphosphoramidate kinase -
  ACH6FR_RS07275 (ACH6FR_07275) - 1390793..1391554 (-) 762 WP_002887980.1 CTP:phosphoglutamine cytidylyltransferase -
  ACH6FR_RS07280 (ACH6FR_07280) - 1391556..1392158 (-) 603 WP_002887983.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46853.52 Da        Isoelectric Point: 9.8673

>NTDB_id=1067007 ACH6FR_RS07260 WP_002887977.1 1387044..1388228(-) (kpsS) [Campylobacter jejuni strain YH013]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIRMEKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=1067007 ACH6FR_RS07260 WP_002887977.1 1387044..1388228(-) (kpsS) [Campylobacter jejuni strain YH013]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATAAGAATGGAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGTAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAATCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAACGATTTAAGTCAAAAATATCATGTAG
AGGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTGTGTAATTTTAAGA
AATATCTTTTACAAACTAACCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0S2CFQ6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

97.97

100

0.98


Multiple sequence alignment