Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FR_RS05305 | Genome accession | NZ_CP172379 |
| Coordinates | 1010112..1010414 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain YH013 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1005112..1015414
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FR_RS05280 (ACH6FR_05280) | rpsR | 1005475..1005735 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FR_RS05285 (ACH6FR_05285) | lon | 1005795..1008170 (-) | 2376 | WP_395941071.1 | endopeptidase La | - |
| ACH6FR_RS05290 (ACH6FR_05290) | bamD | 1008187..1008834 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| ACH6FR_RS05295 (ACH6FR_05295) | fliW | 1008995..1009384 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FR_RS05300 (ACH6FR_05300) | proC | 1009384..1010115 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FR_RS05305 (ACH6FR_05305) | ctsT | 1010112..1010414 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| ACH6FR_RS05310 (ACH6FR_05310) | - | 1010411..1011073 (+) | 663 | WP_044257982.1 | hypothetical protein | - |
| ACH6FR_RS05315 (ACH6FR_05315) | - | 1011070..1011522 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| ACH6FR_RS05320 (ACH6FR_05320) | hemD | 1011519..1012148 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| ACH6FR_RS05325 (ACH6FR_05325) | thiE | 1012126..1012758 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| ACH6FR_RS05330 (ACH6FR_05330) | thiD | 1012748..1013560 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FR_RS05335 (ACH6FR_05335) | - | 1013557..1014243 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| ACH6FR_RS05340 (ACH6FR_05340) | - | 1014240..1015001 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1066998 ACH6FR_RS05305 WP_002853046.1 1010112..1010414(+) (ctsT) [Campylobacter jejuni strain YH013]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1066998 ACH6FR_RS05305 WP_002853046.1 1010112..1010414(+) (ctsT) [Campylobacter jejuni strain YH013]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |