Detailed information NTG1066973

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6FM_RS06465
• Genome accession: NZ_CP172376
• Coordinates: 1202404..1203363 (+)
• Length: 319 a.a.
• NCBI ID: WP_002876195.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain YH014
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1197404..1208363

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6FM_RS06440 (ACH6FM_06435)	neuC	1197967..1199082 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
ACH6FM_RS06445 (ACH6FM_06440)	-	1199079..1200017 (+)	939	Protein_1251	beta-1,4-N-acetylgalactosaminyltransferase	-
ACH6FM_RS06450 (ACH6FM_06445)	-	1200027..1200689 (+)	663	WP_002881429.1	cytidylyltransferase domain-containing protein	-
ACH6FM_RS06455 (ACH6FM_06450)	-	1200684..1201537 (-)	854	Protein_1253	glycosyltransferase	-
ACH6FM_RS06460 (ACH6FM_06455)	waaV	1201521..1202345 (-)	825	WP_052796721.1	glycosyltransferase family 2 protein	-
ACH6FM_RS06465 (ACH6FM_06460)	waaF	1202404..1203363 (+)	960	WP_002876195.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6FM_RS06470 (ACH6FM_06465)	gmhA	1203344..1203904 (-)	561	WP_002876196.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6FM_RS06475 (ACH6FM_06470)	rfaE1	1203901..1205286 (-)	1386	WP_395766511.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6FM_RS06480 (ACH6FM_06475)	rfaD	1205279..1206232 (-)	954	WP_002886910.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6FM_RS06485 (ACH6FM_06480)	gmhB	1206233..1206794 (-)	562	Protein_1259	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
ACH6FM_RS06490 (ACH6FM_06485)	-	1206875..1207177 (+)	303	WP_002852762.1	cytochrome c	-
ACH6FM_RS06495 (ACH6FM_06490)	ccoS	1207200..1207406 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36607.08 Da
• Isoelectric Point: 10.2870

>NTDB_id=1066973 ACH6FM_RS06465 WP_002876195.1 1202404..1203363(+) (waaF) [Campylobacter jejuni strain YH014]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKSEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHR

Nucleotide

• Length: 960 bp

>NTDB_id=1066973 ACH6FM_RS06465 WP_002876195.1 1202404..1203363(+) (waaF) [Campylobacter jejuni strain YH014]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTAGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAACTTCAAGACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAATCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAATCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAACAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.025	99.687	0.937