Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FM_RS06120 | Genome accession | NZ_CP172376 |
| Coordinates | 1132832..1133134 (+) | Length | 100 a.a. |
| NCBI ID | WP_002875928.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain YH014 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1127832..1138134
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FM_RS06095 (ACH6FM_06090) | rpsR | 1128195..1128455 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FM_RS06100 (ACH6FM_06095) | lon | 1128515..1130890 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| ACH6FM_RS06105 (ACH6FM_06100) | - | 1130907..1131554 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| ACH6FM_RS06110 (ACH6FM_06105) | fliW | 1131715..1132104 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FM_RS06115 (ACH6FM_06110) | proC | 1132104..1132835 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FM_RS06120 (ACH6FM_06115) | ctsT | 1132832..1133134 (+) | 303 | WP_002875928.1 | hypothetical protein | Machinery gene |
| ACH6FM_RS06125 (ACH6FM_06120) | - | 1133131..1133793 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| ACH6FM_RS06130 (ACH6FM_06125) | - | 1133790..1134242 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| ACH6FM_RS06135 (ACH6FM_06130) | hemD | 1134239..1134868 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| ACH6FM_RS06140 (ACH6FM_06135) | thiE | 1134846..1135478 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| ACH6FM_RS06145 (ACH6FM_06140) | thiD | 1135468..1136280 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FM_RS06150 (ACH6FM_06145) | - | 1136277..1136963 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| ACH6FM_RS06155 (ACH6FM_06150) | - | 1136960..1137721 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12161.32 Da Isoelectric Point: 9.0653
>NTDB_id=1066971 ACH6FM_RS06120 WP_002875928.1 1132832..1133134(+) (ctsT) [Campylobacter jejuni strain YH014]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1066971 ACH6FM_RS06120 WP_002875928.1 1132832..1133134(+) (ctsT) [Campylobacter jejuni strain YH014]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |