Detailed information
Bioinformatically predicted
Overview
| Name | ctsF | Type | Machinery gene |
| Locus tag | ACH6FX_RS07135 | Genome accession | NZ_CP172375 |
| Coordinates | 1396198..1397379 (-) | Length | 393 a.a. |
| NCBI ID | WP_002894094.1 | Uniprot ID | A0A1J6L696 |
| Organism | Campylobacter jejuni strain YH017 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1391198..1402379
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FX_RS07105 (ACH6FX_07105) | - | 1391743..1392084 (+) | 342 | WP_002784057.1 | hypothetical protein | - |
| ACH6FX_RS07110 (ACH6FX_07110) | flgM | 1392147..1392344 (+) | 198 | WP_002855791.1 | flagellar biosynthesis anti-sigma factor FlgM | - |
| ACH6FX_RS07115 (ACH6FX_07115) | - | 1392386..1392820 (+) | 435 | WP_002779263.1 | flagellar protein FlgN | - |
| ACH6FX_RS07120 (ACH6FX_07120) | flgK | 1392830..1394656 (+) | 1827 | WP_002894098.1 | flagellar hook-associated protein FlgK | - |
| ACH6FX_RS07125 (ACH6FX_07125) | - | 1394673..1395437 (+) | 765 | WP_002894096.1 | TIGR02757 family protein | - |
| ACH6FX_RS07130 (ACH6FX_07130) | - | 1395441..1396205 (+) | 765 | WP_002855821.1 | TSUP family transporter | - |
| ACH6FX_RS07135 (ACH6FX_07135) | ctsF | 1396198..1397379 (-) | 1182 | WP_002894094.1 | type II secretion system F family protein | Machinery gene |
| ACH6FX_RS07140 (ACH6FX_07140) | ctsE | 1397376..1398935 (-) | 1560 | WP_021137528.1 | GspE/PulE family protein | Machinery gene |
| ACH6FX_RS07145 (ACH6FX_07145) | ctsX | 1398925..1399512 (-) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| ACH6FX_RS07150 (ACH6FX_07150) | ctsP | 1399516..1400124 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| ACH6FX_RS07155 (ACH6FX_07155) | ctsD | 1400117..1401529 (-) | 1413 | WP_002856543.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| ACH6FX_RS07160 (ACH6FX_07160) | ctsR | 1401507..1401818 (-) | 312 | WP_002855438.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 393 a.a. Molecular weight: 45736.38 Da Isoelectric Point: 9.2540
>NTDB_id=1066954 ACH6FX_RS07135 WP_002894094.1 1396198..1397379(-) (ctsF) [Campylobacter jejuni strain YH017]
MKFYEVEFLKNNQNYTKTIKAENLNIAQTKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIKE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDSYGIFCIFLFVVFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLVFLEPMMTLFVAFLVLFLALGIFLPMWELSSGVNFN
MKFYEVEFLKNNQNYTKTIKAENLNIAQTKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIKE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDSYGIFCIFLFVVFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLVFLEPMMTLFVAFLVLFLALGIFLPMWELSSGVNFN
Nucleotide
Download Length: 1182 bp
>NTDB_id=1066954 ACH6FX_RS07135 WP_002894094.1 1396198..1397379(-) (ctsF) [Campylobacter jejuni strain YH017]
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATATAGC
ACAAACAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTCATACTCTTTTTTAAAGAGCTGGCTTTATTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAAAGAA
TTATATCTTATGCATTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGCTAGCTTTGATAAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTGAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATAGCTATGGAATTTTTTGCA
TATTTTTGTTTGTTGTTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCTAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTCAGTGTTGCGATGAAAAGTGGAAGACTTGAAGTGTTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGTGAAAATTTAATGGATAGATTTTTGGTTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGTTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGCTCAGGGGTCAATTTTAACTAA
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATATAGC
ACAAACAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTCATACTCTTTTTTAAAGAGCTGGCTTTATTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAAAGAA
TTATATCTTATGCATTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGCTAGCTTTGATAAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTGAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATAGCTATGGAATTTTTTGCA
TATTTTTGTTTGTTGTTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCTAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTCAGTGTTGCGATGAAAAGTGGAAGACTTGAAGTGTTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGTGAAAATTTAATGGATAGATTTTTGGTTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGTTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGCTCAGGGGTCAATTTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsF | Campylobacter jejuni subsp. jejuni 81-176 |
97.959 |
99.746 |
0.977 |