Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FX_RS05285 | Genome accession | NZ_CP172375 |
| Coordinates | 1019909..1020211 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain YH017 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1014909..1025211
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FX_RS05260 (ACH6FX_05260) | rpsR | 1015271..1015531 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FX_RS05265 (ACH6FX_05265) | lon | 1015592..1017967 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| ACH6FX_RS05270 (ACH6FX_05270) | - | 1017984..1018631 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| ACH6FX_RS05275 (ACH6FX_05275) | fliW | 1018792..1019181 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FX_RS05280 (ACH6FX_05280) | proC | 1019181..1019912 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FX_RS05285 (ACH6FX_05285) | ctsT | 1019909..1020211 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| ACH6FX_RS05290 (ACH6FX_05290) | - | 1020208..1020870 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| ACH6FX_RS05295 (ACH6FX_05295) | - | 1020867..1021319 (+) | 453 | WP_002894305.1 | hypothetical protein | - |
| ACH6FX_RS05300 (ACH6FX_05300) | hemD | 1021316..1021945 (-) | 630 | WP_002864257.1 | uroporphyrinogen-III synthase | - |
| ACH6FX_RS05305 (ACH6FX_05305) | thiE | 1021923..1022555 (-) | 633 | WP_002864256.1 | thiamine phosphate synthase | - |
| ACH6FX_RS05310 (ACH6FX_05310) | thiD | 1022545..1023357 (-) | 813 | WP_002894307.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FX_RS05315 (ACH6FX_05315) | - | 1023354..1024040 (-) | 687 | WP_002894310.1 | endonuclease III domain-containing protein | - |
| ACH6FX_RS05320 (ACH6FX_05320) | - | 1024037..1024798 (-) | 762 | WP_002894311.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1066944 ACH6FX_RS05285 WP_002853046.1 1019909..1020211(+) (ctsT) [Campylobacter jejuni strain YH017]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1066944 ACH6FX_RS05285 WP_002853046.1 1019909..1020211(+) (ctsT) [Campylobacter jejuni strain YH017]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |