Detailed information NTG1066864

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6FL_RS05670
• Genome accession: NZ_CP172366
• Coordinates: 1087605..1088564 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain YH020
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1082605..1093564

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6FL_RS05645 (ACH6FL_05645)	neuC	1083172..1084287 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
ACH6FL_RS05650 (ACH6FL_05650)	-	1084284..1085150 (+)	867	Protein_1092	beta-1,4-N-acetylgalactosaminyltransferase	-
ACH6FL_RS05655 (ACH6FL_05655)	-	1085232..1085894 (+)	663	WP_002881429.1	cytidylyltransferase domain-containing protein	-
ACH6FL_RS05660 (ACH6FL_05660)	-	1085889..1086738 (-)	850	Protein_1094	glycosyltransferase	-
ACH6FL_RS05665 (ACH6FL_05665)	waaV	1086722..1087546 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
ACH6FL_RS05670 (ACH6FL_05670)	waaF	1087605..1088564 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6FL_RS05675 (ACH6FL_05675)	gmhA	1088545..1089105 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6FL_RS05680 (ACH6FL_05680)	rfaE1	1089102..1090487 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6FL_RS05685 (ACH6FL_05685)	rfaD	1090480..1091433 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6FL_RS05690 (ACH6FL_05690)	gmhB	1091434..1091994 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
ACH6FL_RS05695 (ACH6FL_05695)	-	1092076..1092378 (+)	303	WP_002852762.1	cytochrome c	-
ACH6FL_RS05700 (ACH6FL_05700)	ccoS	1092401..1092607 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=1066864 ACH6FL_RS05670 WP_002875425.1 1087605..1088564(+) (waaF) [Campylobacter jejuni strain YH020]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=1066864 ACH6FL_RS05670 WP_002875425.1 1087605..1088564(+) (waaF) [Campylobacter jejuni strain YH020]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1