Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FL_RS05320 | Genome accession | NZ_CP172366 |
| Coordinates | 1017432..1017734 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain YH020 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1012432..1022734
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FL_RS05295 (ACH6FL_05295) | rpsR | 1012794..1013054 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FL_RS05300 (ACH6FL_05300) | lon | 1013115..1015490 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| ACH6FL_RS05305 (ACH6FL_05305) | - | 1015507..1016154 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| ACH6FL_RS05310 (ACH6FL_05310) | fliW | 1016315..1016704 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FL_RS05315 (ACH6FL_05315) | proC | 1016704..1017435 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FL_RS05320 (ACH6FL_05320) | ctsT | 1017432..1017734 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| ACH6FL_RS05325 (ACH6FL_05325) | - | 1017731..1018393 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| ACH6FL_RS05330 (ACH6FL_05330) | - | 1018390..1018842 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| ACH6FL_RS05335 (ACH6FL_05335) | hemD | 1018839..1019468 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| ACH6FL_RS05340 (ACH6FL_05340) | thiE | 1019446..1020078 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| ACH6FL_RS05345 (ACH6FL_05345) | thiD | 1020068..1020880 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FL_RS05350 (ACH6FL_05350) | - | 1020877..1021563 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| ACH6FL_RS05355 (ACH6FL_05355) | - | 1021560..1022321 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1066862 ACH6FL_RS05320 WP_002853046.1 1017432..1017734(+) (ctsT) [Campylobacter jejuni strain YH020]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1066862 ACH6FL_RS05320 WP_002853046.1 1017432..1017734(+) (ctsT) [Campylobacter jejuni strain YH020]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |