Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACH6FI_RS08055 Genome accession   NZ_CP172364
Coordinates   1499057..1500025 (+) Length   322 a.a.
NCBI ID   WP_071311307.1    Uniprot ID   A0A5Z5DMU4
Organism   Campylobacter jejuni strain YH021     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1494057..1505025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH6FI_RS08030 (ACH6FI_08025) cdsA 1494968..1495693 (-) 726 WP_071311306.1 phosphatidate cytidylyltransferase -
  ACH6FI_RS08035 (ACH6FI_08030) - 1495702..1496040 (-) 339 WP_002852397.1 hypothetical protein -
  ACH6FI_RS08040 (ACH6FI_08035) - 1496042..1497349 (-) 1308 WP_052789964.1 NFACT family protein -
  ACH6FI_RS08045 (ACH6FI_08040) mobA 1497411..1497986 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  ACH6FI_RS08050 (ACH6FI_08045) pldA 1497983..1498971 (+) 989 Protein_1569 phospholipase A -
  ACH6FI_RS08055 (ACH6FI_08050) ceuB 1499057..1500025 (+) 969 WP_071311307.1 ABC transporter permease Machinery gene
  ACH6FI_RS08060 (ACH6FI_08055) ceuC 1500018..1500956 (+) 939 WP_038816948.1 iron chelate uptake ABC transporter family permease subunit -
  ACH6FI_RS08065 (ACH6FI_08060) ceuD 1500953..1501708 (+) 756 WP_071311308.1 ABC transporter ATP-binding protein -
  ACH6FI_RS08070 (ACH6FI_08065) ceuB 1501721..1502713 (+) 993 WP_395766411.1 enterochelin ABC transporter substrate-binding protein CeuB -
  ACH6FI_RS08080 (ACH6FI_08075) - 1502939..1503493 (-) 555 WP_043012925.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35485.40 Da        Isoelectric Point: 9.6678

>NTDB_id=1066842 ACH6FI_RS08055 WP_071311307.1 1499057..1500025(+) (ceuB) [Campylobacter jejuni strain YH021]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=1066842 ACH6FI_RS08055 WP_071311307.1 1499057..1500025(+) (ceuB) [Campylobacter jejuni strain YH021]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATCCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCATC
TTTTTTCACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGCATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Z5DMU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991

Multiple sequence alignment