Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FI_RS06690 | Genome accession | NZ_CP172364 |
| Coordinates | 1226297..1226599 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain YH021 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1221297..1231599
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FI_RS06665 (ACH6FI_06660) | rpsR | 1221660..1221920 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FI_RS06670 (ACH6FI_06665) | lon | 1221980..1224355 (-) | 2376 | WP_395766396.1 | endopeptidase La | - |
| ACH6FI_RS06675 (ACH6FI_06670) | bamD | 1224372..1225019 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| ACH6FI_RS06680 (ACH6FI_06675) | fliW | 1225180..1225569 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FI_RS06685 (ACH6FI_06680) | proC | 1225569..1226300 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FI_RS06690 (ACH6FI_06685) | ctsT | 1226297..1226599 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| ACH6FI_RS06695 (ACH6FI_06690) | - | 1226596..1227259 (+) | 664 | Protein_1301 | hypothetical protein | - |
| ACH6FI_RS06700 (ACH6FI_06695) | - | 1227256..1227708 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| ACH6FI_RS06705 (ACH6FI_06700) | hemD | 1227705..1228334 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| ACH6FI_RS06710 (ACH6FI_06705) | thiE | 1228312..1228944 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| ACH6FI_RS06715 (ACH6FI_06710) | thiD | 1228934..1229746 (-) | 813 | WP_395766397.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FI_RS06720 (ACH6FI_06715) | - | 1229743..1230429 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| ACH6FI_RS06725 (ACH6FI_06720) | - | 1230426..1231187 (-) | 762 | WP_002871793.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1066835 ACH6FI_RS06690 WP_002853046.1 1226297..1226599(+) (ctsT) [Campylobacter jejuni strain YH021]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1066835 ACH6FI_RS06690 WP_002853046.1 1226297..1226599(+) (ctsT) [Campylobacter jejuni strain YH021]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |