Detailed information NTG1066782

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6FZ_RS05630
• Genome accession: NZ_CP172361
• Coordinates: 1082342..1083301 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain YH023
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1077342..1088301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6FZ_RS05605 (ACH6FZ_05605)	neuC	1077909..1079024 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
ACH6FZ_RS05610 (ACH6FZ_05610)	-	1079021..1079887 (+)	867	Protein_1084	beta-1,4-N-acetylgalactosaminyltransferase	-
ACH6FZ_RS05615 (ACH6FZ_05615)	-	1079969..1080631 (+)	663	WP_002881429.1	cytidylyltransferase domain-containing protein	-
ACH6FZ_RS05620 (ACH6FZ_05620)	-	1080626..1081475 (-)	850	Protein_1086	glycosyltransferase	-
ACH6FZ_RS05625 (ACH6FZ_05625)	waaV	1081459..1082283 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
ACH6FZ_RS05630 (ACH6FZ_05630)	waaF	1082342..1083301 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6FZ_RS05635 (ACH6FZ_05635)	gmhA	1083282..1083842 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6FZ_RS05640 (ACH6FZ_05640)	rfaE1	1083839..1085224 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6FZ_RS05645 (ACH6FZ_05645)	rfaD	1085217..1086170 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6FZ_RS05650 (ACH6FZ_05650)	gmhB	1086171..1086731 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
ACH6FZ_RS05655 (ACH6FZ_05655)	-	1086813..1087115 (+)	303	WP_002852762.1	cytochrome c	-
ACH6FZ_RS05660 (ACH6FZ_05660)	ccoS	1087138..1087344 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=1066782 ACH6FZ_RS05630 WP_002875425.1 1082342..1083301(+) (waaF) [Campylobacter jejuni strain YH023]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=1066782 ACH6FZ_RS05630 WP_002875425.1 1082342..1083301(+) (waaF) [Campylobacter jejuni strain YH023]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1