Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FZ_RS05280 | Genome accession | NZ_CP172361 |
| Coordinates | 1012168..1012470 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain YH023 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1007168..1017470
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FZ_RS05255 (ACH6FZ_05255) | rpsR | 1007530..1007790 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FZ_RS05260 (ACH6FZ_05260) | lon | 1007851..1010226 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| ACH6FZ_RS05265 (ACH6FZ_05265) | - | 1010243..1010890 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| ACH6FZ_RS05270 (ACH6FZ_05270) | fliW | 1011051..1011440 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FZ_RS05275 (ACH6FZ_05275) | proC | 1011440..1012171 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FZ_RS05280 (ACH6FZ_05280) | ctsT | 1012168..1012470 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| ACH6FZ_RS05285 (ACH6FZ_05285) | - | 1012467..1013129 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| ACH6FZ_RS05290 (ACH6FZ_05290) | - | 1013126..1013578 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| ACH6FZ_RS05295 (ACH6FZ_05295) | hemD | 1013575..1014204 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| ACH6FZ_RS05300 (ACH6FZ_05300) | thiE | 1014182..1014814 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| ACH6FZ_RS05305 (ACH6FZ_05305) | thiD | 1014804..1015616 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FZ_RS05310 (ACH6FZ_05310) | - | 1015613..1016299 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| ACH6FZ_RS05315 (ACH6FZ_05315) | - | 1016296..1017057 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1066780 ACH6FZ_RS05280 WP_002853046.1 1012168..1012470(+) (ctsT) [Campylobacter jejuni strain YH023]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1066780 ACH6FZ_RS05280 WP_002853046.1 1012168..1012470(+) (ctsT) [Campylobacter jejuni strain YH023]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |