Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   ACH6FS_RS07305 Genome accession   NZ_CP172358
Coordinates   1408097..1409281 (-) Length   394 a.a.
NCBI ID   WP_002857981.1    Uniprot ID   Q0P8K1
Organism   Campylobacter jejuni strain YH024     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1403097..1414281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH6FS_RS07280 (ACH6FS_07280) fliL 1404245..1404781 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  ACH6FS_RS07285 (ACH6FS_07285) acpS 1404781..1405128 (+) 348 WP_002825806.1 holo-ACP synthase -
  ACH6FS_RS07290 (ACH6FS_07290) - 1405129..1405548 (-) 420 WP_002855518.1 hypothetical protein -
  ACH6FS_RS07295 (ACH6FS_07295) - 1405545..1406906 (-) 1362 WP_002930948.1 cytochrome P450 -
  ACH6FS_RS07300 (ACH6FS_07300) - 1406903..1408024 (-) 1122 WP_395766050.1 DUF829 domain-containing protein -
  ACH6FS_RS07305 (ACH6FS_07305) kpsS 1408097..1409281 (-) 1185 WP_002857981.1 capsule polysaccharide modification protein KpsS Regulator
  ACH6FS_RS07310 (ACH6FS_07310) kpsC 1409278..1411347 (-) 2070 WP_395766051.1 capsular polysaccharide biosynthesis protein -
  ACH6FS_RS07315 (ACH6FS_07315) cysC 1411344..1411856 (-) 513 WP_002894813.1 cytidine diphosphoramidate kinase -
  ACH6FS_RS07320 (ACH6FS_07320) - 1411846..1412607 (-) 762 WP_002872736.1 CTP:phosphoglutamine cytidylyltransferase -
  ACH6FS_RS07325 (ACH6FS_07325) - 1412609..1413211 (-) 603 WP_002872737.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46938.68 Da        Isoelectric Point: 9.9831

>NTDB_id=1066762 ACH6FS_RS07305 WP_002857981.1 1408097..1409281(-) (kpsS) [Campylobacter jejuni strain YH024]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYFKLINDLSRKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYNFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=1066762 ACH6FS_RS07305 WP_002857981.1 1408097..1409281(-) (kpsS) [Campylobacter jejuni strain YH024]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTTTAAACTTATAAATGATTTAAGTCGAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATAATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAGA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q0P8K1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1


Multiple sequence alignment