Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FS_RS05400 | Genome accession | NZ_CP172358 |
| Coordinates | 1035061..1035363 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain YH024 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1030061..1040363
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FS_RS05375 (ACH6FS_05375) | rpsR | 1030423..1030683 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FS_RS05380 (ACH6FS_05380) | lon | 1030744..1033119 (-) | 2376 | WP_395766031.1 | endopeptidase La | - |
| ACH6FS_RS05385 (ACH6FS_05385) | - | 1033136..1033783 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| ACH6FS_RS05390 (ACH6FS_05390) | fliW | 1033944..1034333 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FS_RS05395 (ACH6FS_05395) | proC | 1034333..1035064 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FS_RS05400 (ACH6FS_05400) | ctsT | 1035061..1035363 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| ACH6FS_RS05405 (ACH6FS_05405) | - | 1035360..1036022 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| ACH6FS_RS05410 (ACH6FS_05410) | - | 1036019..1036471 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| ACH6FS_RS05415 (ACH6FS_05415) | hemD | 1036468..1037097 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| ACH6FS_RS05420 (ACH6FS_05420) | thiE | 1037075..1037707 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| ACH6FS_RS05425 (ACH6FS_05425) | thiD | 1037697..1038509 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FS_RS05430 (ACH6FS_05430) | - | 1038506..1039192 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| ACH6FS_RS05435 (ACH6FS_05435) | - | 1039189..1039950 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=1066753 ACH6FS_RS05400 WP_002855822.1 1035061..1035363(+) (ctsT) [Campylobacter jejuni strain YH024]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1066753 ACH6FS_RS05400 WP_002855822.1 1035061..1035363(+) (ctsT) [Campylobacter jejuni strain YH024]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |