Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FF_RS05540 | Genome accession | NZ_CP172356 |
| Coordinates | 1060876..1061178 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain YH025 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1055876..1066178
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FF_RS05515 (ACH6FF_05515) | rpsR | 1056238..1056498 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FF_RS05520 (ACH6FF_05520) | lon | 1056559..1058934 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| ACH6FF_RS05525 (ACH6FF_05525) | - | 1058951..1059598 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| ACH6FF_RS05530 (ACH6FF_05530) | fliW | 1059759..1060148 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FF_RS05535 (ACH6FF_05535) | proC | 1060148..1060879 (+) | 732 | WP_002868635.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FF_RS05540 (ACH6FF_05540) | ctsT | 1060876..1061178 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| ACH6FF_RS05545 (ACH6FF_05545) | - | 1061175..1061837 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| ACH6FF_RS05550 (ACH6FF_05550) | - | 1061834..1062286 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| ACH6FF_RS05555 (ACH6FF_05555) | hemD | 1062283..1062912 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| ACH6FF_RS05560 (ACH6FF_05560) | thiE | 1062890..1063522 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| ACH6FF_RS05565 (ACH6FF_05565) | thiD | 1063512..1064324 (-) | 813 | WP_002868633.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FF_RS05570 (ACH6FF_05570) | - | 1064321..1065007 (-) | 687 | WP_002868632.1 | endonuclease III domain-containing protein | - |
| ACH6FF_RS05575 (ACH6FF_05575) | - | 1065004..1065765 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1066726 ACH6FF_RS05540 WP_002853046.1 1060876..1061178(+) (ctsT) [Campylobacter jejuni strain YH025]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1066726 ACH6FF_RS05540 WP_002853046.1 1060876..1061178(+) (ctsT) [Campylobacter jejuni strain YH025]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |