Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FW_RS05560 | Genome accession | NZ_CP172352 |
| Coordinates | 1048311..1048613 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain YH027 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1043311..1053613
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FW_RS05535 (ACH6FW_05535) | rpsR | 1043673..1043933 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FW_RS05540 (ACH6FW_05540) | lon | 1043994..1046369 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| ACH6FW_RS05545 (ACH6FW_05545) | - | 1046386..1047033 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| ACH6FW_RS05550 (ACH6FW_05550) | fliW | 1047194..1047583 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FW_RS05555 (ACH6FW_05555) | proC | 1047583..1048314 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FW_RS05560 (ACH6FW_05560) | ctsT | 1048311..1048613 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| ACH6FW_RS05565 (ACH6FW_05565) | - | 1048610..1049272 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| ACH6FW_RS05570 (ACH6FW_05570) | - | 1049269..1049721 (+) | 453 | WP_002894305.1 | hypothetical protein | - |
| ACH6FW_RS05575 (ACH6FW_05575) | hemD | 1049718..1050347 (-) | 630 | WP_002864257.1 | uroporphyrinogen-III synthase | - |
| ACH6FW_RS05580 (ACH6FW_05580) | thiE | 1050325..1050957 (-) | 633 | WP_002864256.1 | thiamine phosphate synthase | - |
| ACH6FW_RS05585 (ACH6FW_05585) | thiD | 1050947..1051759 (-) | 813 | WP_002894307.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FW_RS05590 (ACH6FW_05590) | - | 1051756..1052442 (-) | 687 | WP_002894310.1 | endonuclease III domain-containing protein | - |
| ACH6FW_RS05595 (ACH6FW_05595) | - | 1052439..1053200 (-) | 762 | WP_002894311.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1066673 ACH6FW_RS05560 WP_002853046.1 1048311..1048613(+) (ctsT) [Campylobacter jejuni strain YH027]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1066673 ACH6FW_RS05560 WP_002853046.1 1048311..1048613(+) (ctsT) [Campylobacter jejuni strain YH027]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |