Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FO_RS05515 | Genome accession | NZ_CP172351 |
| Coordinates | 1055678..1055980 (+) | Length | 100 a.a. |
| NCBI ID | WP_057042823.1 | Uniprot ID | A0A5Y7GJZ7 |
| Organism | Campylobacter jejuni strain YH028 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1050678..1060980
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FO_RS05490 (ACH6FO_05490) | rpsR | 1051040..1051300 (+) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
| ACH6FO_RS05495 (ACH6FO_05495) | lon | 1051361..1053736 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| ACH6FO_RS05500 (ACH6FO_05500) | bamD | 1053753..1054400 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| ACH6FO_RS05505 (ACH6FO_05505) | fliW | 1054561..1054950 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FO_RS05510 (ACH6FO_05510) | proC | 1054950..1055681 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FO_RS05515 (ACH6FO_05515) | ctsT | 1055678..1055980 (+) | 303 | WP_057042823.1 | hypothetical protein | Machinery gene |
| ACH6FO_RS05520 (ACH6FO_05520) | - | 1055977..1056639 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| ACH6FO_RS05525 (ACH6FO_05525) | - | 1056636..1057088 (+) | 453 | WP_032603535.1 | hypothetical protein | - |
| ACH6FO_RS05530 (ACH6FO_05530) | hemD | 1057085..1057714 (-) | 630 | WP_002866105.1 | uroporphyrinogen-III synthase | - |
| ACH6FO_RS05535 (ACH6FO_05535) | thiE | 1057692..1058324 (-) | 633 | WP_038817203.1 | thiamine phosphate synthase | - |
| ACH6FO_RS05540 (ACH6FO_05540) | thiD | 1058314..1059126 (-) | 813 | WP_002864255.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FO_RS05545 (ACH6FO_05545) | - | 1059123..1059809 (-) | 687 | WP_038817202.1 | endonuclease III domain-containing protein | - |
| ACH6FO_RS05550 (ACH6FO_05550) | - | 1059806..1060568 (-) | 763 | Protein_1072 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12163.30 Da Isoelectric Point: 9.0653
>NTDB_id=1066646 ACH6FO_RS05515 WP_057042823.1 1055678..1055980(+) (ctsT) [Campylobacter jejuni strain YH028]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIILQEQFVNDG
IFQFQKLYFQDQNYSVYFKK
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIILQEQFVNDG
IFQFQKLYFQDQNYSVYFKK
Nucleotide
Download Length: 303 bp
>NTDB_id=1066646 ACH6FO_RS05515 WP_057042823.1 1055678..1055980(+) (ctsT) [Campylobacter jejuni strain YH028]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAATTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAAAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAATTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |