Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   ACH6FH_RS06750 Genome accession   NZ_CP172349
Coordinates   1322349..1323317 (+) Length   322 a.a.
NCBI ID   WP_002869322.1    Uniprot ID   -
Organism   Campylobacter jejuni strain YH029     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1317349..1328317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH6FH_RS06725 (ACH6FH_06725) cdsA 1318256..1318981 (-) 726 WP_002869324.1 phosphatidate cytidylyltransferase -
  ACH6FH_RS06730 (ACH6FH_06730) - 1318990..1319328 (-) 339 WP_002855905.1 hypothetical protein -
  ACH6FH_RS06735 (ACH6FH_06735) - 1319330..1320637 (-) 1308 WP_002856257.1 NFACT family protein -
  ACH6FH_RS06740 (ACH6FH_06740) mobA 1320699..1321274 (+) 576 WP_002855734.1 molybdenum cofactor guanylyltransferase -
  ACH6FH_RS06745 (ACH6FH_06745) pldA 1321271..1322260 (+) 990 WP_002869323.1 phospholipase A -
  ACH6FH_RS06750 (ACH6FH_06750) ceuB 1322349..1323317 (+) 969 WP_002869322.1 ABC transporter permease Machinery gene
  ACH6FH_RS06755 (ACH6FH_06755) ceuC 1323310..1324248 (+) 939 WP_002869321.1 iron chelate uptake ABC transporter family permease subunit -
  ACH6FH_RS06760 (ACH6FH_06760) ceuD 1324245..1325000 (+) 756 WP_002856278.1 ABC transporter ATP-binding protein -
  ACH6FH_RS06765 (ACH6FH_06765) ceuB 1325013..1326005 (+) 993 WP_002856494.1 enterochelin ABC transporter substrate-binding protein CeuB -
  ACH6FH_RS06770 (ACH6FH_06770) - 1326159..1326380 (+) 222 WP_002856036.1 hypothetical protein -
  ACH6FH_RS06775 (ACH6FH_06775) - 1326381..1326662 (+) 282 WP_009882907.1 type II toxin-antitoxin system RelE/ParE family toxin -
  ACH6FH_RS06785 (ACH6FH_06785) - 1327022..1327576 (-) 555 WP_002855904.1 membrane protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35397.29 Da        Isoelectric Point: 9.6678

>NTDB_id=1066625 ACH6FH_RS06750 WP_002869322.1 1322349..1323317(+) (ceuB) [Campylobacter jejuni strain YH029]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=1066625 ACH6FH_RS06750 WP_002869322.1 1322349..1323317(+) (ceuB) [Campylobacter jejuni strain YH029]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACGGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGGACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACCCAAGCTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTTTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

100

100

1


Multiple sequence alignment