Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FH_RS05485 | Genome accession | NZ_CP172349 |
| Coordinates | 1065761..1066063 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain YH029 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1060761..1071063
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FH_RS05460 (ACH6FH_05460) | rpsR | 1061124..1061384 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FH_RS05465 (ACH6FH_05465) | lon | 1061444..1063819 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| ACH6FH_RS05470 (ACH6FH_05470) | - | 1063836..1064483 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| ACH6FH_RS05475 (ACH6FH_05475) | fliW | 1064644..1065033 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FH_RS05480 (ACH6FH_05480) | proC | 1065033..1065764 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FH_RS05485 (ACH6FH_05485) | ctsT | 1065761..1066063 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| ACH6FH_RS05490 (ACH6FH_05490) | - | 1066060..1066722 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| ACH6FH_RS05495 (ACH6FH_05495) | - | 1066719..1067171 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| ACH6FH_RS05500 (ACH6FH_05500) | hemD | 1067168..1067797 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| ACH6FH_RS05505 (ACH6FH_05505) | thiE | 1067775..1068407 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| ACH6FH_RS05510 (ACH6FH_05510) | thiD | 1068397..1069209 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FH_RS05515 (ACH6FH_05515) | - | 1069206..1069892 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| ACH6FH_RS05520 (ACH6FH_05520) | - | 1069889..1070650 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=1066618 ACH6FH_RS05485 WP_002855822.1 1065761..1066063(+) (ctsT) [Campylobacter jejuni strain YH029]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1066618 ACH6FH_RS05485 WP_002855822.1 1065761..1066063(+) (ctsT) [Campylobacter jejuni strain YH029]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |