Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | ACH6FB_RS06010 | Genome accession | NZ_CP172348 |
| Coordinates | 1160861..1161820 (+) | Length | 319 a.a. |
| NCBI ID | WP_002874233.1 | Uniprot ID | A0A696MX70 |
| Organism | Campylobacter jejuni strain YH030 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1155861..1166820
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FB_RS05985 (ACH6FB_05985) | neuB | 1156360..1157400 (+) | 1041 | WP_002874241.1 | N-acetylneuraminate synthase | - |
| ACH6FB_RS05990 (ACH6FB_05990) | neuC | 1157397..1158515 (+) | 1119 | WP_395766233.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| ACH6FB_RS05995 (ACH6FB_05995) | - | 1158512..1159177 (+) | 666 | WP_002874239.1 | cytidylyltransferase domain-containing protein | - |
| ACH6FB_RS06000 (ACH6FB_06000) | - | 1159301..1160050 (+) | 750 | WP_002874235.1 | CatB-related O-acetyltransferase | - |
| ACH6FB_RS06005 (ACH6FB_06005) | waaV | 1159990..1160802 (-) | 813 | WP_002874234.1 | glycosyltransferase family 2 protein | - |
| ACH6FB_RS06010 (ACH6FB_06010) | waaF | 1160861..1161820 (+) | 960 | WP_002874233.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| ACH6FB_RS06015 (ACH6FB_06015) | gmhA | 1161801..1162361 (-) | 561 | WP_002874231.1 | D-sedoheptulose 7-phosphate isomerase | - |
| ACH6FB_RS06020 (ACH6FB_06020) | rfaE1 | 1162358..1163743 (-) | 1386 | WP_395766234.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| ACH6FB_RS06025 (ACH6FB_06025) | rfaD | 1163736..1164689 (-) | 954 | WP_002924070.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| ACH6FB_RS06030 (ACH6FB_06030) | gmhB | 1164690..1165250 (-) | 561 | WP_002924071.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| ACH6FB_RS06035 (ACH6FB_06035) | - | 1165331..1165633 (+) | 303 | WP_002852762.1 | cytochrome c | - |
| ACH6FB_RS06040 (ACH6FB_06040) | ccoS | 1165656..1165862 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 36659.22 Da Isoelectric Point: 10.3202
>NTDB_id=1066593 ACH6FB_RS06010 WP_002874233.1 1160861..1161820(+) (waaF) [Campylobacter jejuni strain YH030]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVMEEARNLLKNSHR
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVMEEARNLLKNSHR
Nucleotide
Download Length: 960 bp
>NTDB_id=1066593 ACH6FB_RS06010 WP_002874233.1 1160861..1161820(+) (waaF) [Campylobacter jejuni strain YH030]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCGCTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAACTTCAAGACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAATCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATCACAAACGACAGT
GGTCCTATGCACCTAAGTGCAGTTTATAAGGTAAAAACCGTGGCCATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCATAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATGGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCGCTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAACTTCAAGACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAATCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATCACAAACGACAGT
GGTCCTATGCACCTAAGTGCAGTTTATAAGGTAAAAACCGTGGCCATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCATAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATGGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.34 |
99.687 |
0.94 |