Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FB_RS05675 | Genome accession | NZ_CP172348 |
| Coordinates | 1093323..1093625 (+) | Length | 100 a.a. |
| NCBI ID | WP_002875928.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain YH030 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1088323..1098625
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FB_RS05650 (ACH6FB_05650) | rpsR | 1088686..1088946 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| ACH6FB_RS05655 (ACH6FB_05655) | lon | 1089006..1091381 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| ACH6FB_RS05660 (ACH6FB_05660) | - | 1091398..1092045 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| ACH6FB_RS05665 (ACH6FB_05665) | fliW | 1092206..1092595 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| ACH6FB_RS05670 (ACH6FB_05670) | proC | 1092595..1093326 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FB_RS05675 (ACH6FB_05675) | ctsT | 1093323..1093625 (+) | 303 | WP_002875928.1 | hypothetical protein | Machinery gene |
| ACH6FB_RS05680 (ACH6FB_05680) | - | 1093622..1094284 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| ACH6FB_RS05685 (ACH6FB_05685) | - | 1094281..1094733 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| ACH6FB_RS05690 (ACH6FB_05690) | hemD | 1094730..1095359 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| ACH6FB_RS05695 (ACH6FB_05695) | thiE | 1095337..1095969 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| ACH6FB_RS05700 (ACH6FB_05700) | thiD | 1095959..1096771 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FB_RS05705 (ACH6FB_05705) | - | 1096768..1097454 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| ACH6FB_RS05710 (ACH6FB_05710) | - | 1097451..1098212 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12161.32 Da Isoelectric Point: 9.0653
>NTDB_id=1066591 ACH6FB_RS05675 WP_002875928.1 1093323..1093625(+) (ctsT) [Campylobacter jejuni strain YH030]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1066591 ACH6FB_RS05675 WP_002875928.1 1093323..1093625(+) (ctsT) [Campylobacter jejuni strain YH030]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |