Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   ACH2FV_RS11170 Genome accession   NZ_CP172339
Coordinates   2191649..2192452 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus safensis subsp. safensis strain KGU003     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2186649..2197452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH2FV_RS11150 (ACH2FV_11150) - 2188855..2189091 (+) 237 WP_024422931.1 DUF2627 domain-containing protein -
  ACH2FV_RS11155 (ACH2FV_11155) - 2189128..2189865 (-) 738 WP_163115357.1 glycerophosphodiester phosphodiesterase -
  ACH2FV_RS11160 (ACH2FV_11160) - 2190094..2191194 (-) 1101 WP_326349565.1 Rap family tetratricopeptide repeat protein -
  ACH2FV_RS11165 (ACH2FV_11165) - 2191182..2191379 (-) 198 WP_024422934.1 hypothetical protein -
  ACH2FV_RS11170 (ACH2FV_11170) spo0A 2191649..2192452 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  ACH2FV_RS11175 (ACH2FV_11175) spoIVB 2192737..2194014 (-) 1278 WP_342495559.1 SpoIVB peptidase -
  ACH2FV_RS11180 (ACH2FV_11180) recN 2194215..2195948 (-) 1734 WP_342495560.1 DNA repair protein RecN Machinery gene
  ACH2FV_RS11185 (ACH2FV_11185) ahrC 2195982..2196431 (-) 450 WP_024422938.1 transcriptional regulator AhrC/ArgR -
  ACH2FV_RS11190 (ACH2FV_11190) - 2196595..2197449 (-) 855 WP_041106824.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=1066512 ACH2FV_RS11170 WP_024422935.1 2191649..2192452(-) (spo0A) [Bacillus safensis subsp. safensis strain KGU003]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1066512 ACH2FV_RS11170 WP_024422935.1 2191649..2192452(-) (spo0A) [Bacillus safensis subsp. safensis strain KGU003]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTCGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCGATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATTACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCTAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTCGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGATTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment