Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ACH2FV_RS08665 | Genome accession | NZ_CP172339 |
| Coordinates | 1709955..1710335 (+) | Length | 126 a.a. |
| NCBI ID | WP_044335941.1 | Uniprot ID | A0AAP7UKB4 |
| Organism | Bacillus safensis subsp. safensis strain KGU003 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 1704955..1715335
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH2FV_RS08655 (ACH2FV_08655) | - | 1705452..1708595 (+) | 3144 | WP_395894645.1 | bifunctional cytochrome P450/NADPH--P450 reductase | - |
| ACH2FV_RS08660 (ACH2FV_08660) | - | 1708789..1709697 (+) | 909 | WP_395894647.1 | trypsin-like serine peptidase | - |
| ACH2FV_RS08665 (ACH2FV_08665) | nucA/comI | 1709955..1710335 (+) | 381 | WP_044335941.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| ACH2FV_RS08670 (ACH2FV_08670) | - | 1710480..1711328 (+) | 849 | WP_041109222.1 | STAS domain-containing protein | - |
| ACH2FV_RS08675 (ACH2FV_08675) | - | 1711361..1711903 (-) | 543 | WP_041109224.1 | IseA DL-endopeptidase inhibitor family protein | - |
| ACH2FV_RS08680 (ACH2FV_08680) | - | 1712199..1712648 (+) | 450 | WP_041109226.1 | hypothetical protein | - |
| ACH2FV_RS08685 (ACH2FV_08685) | lexA | 1712694..1713314 (-) | 621 | WP_034283422.1 | transcriptional repressor LexA | - |
| ACH2FV_RS08690 (ACH2FV_08690) | yneA | 1713473..1713784 (+) | 312 | WP_024425130.1 | cell division suppressor protein YneA | - |
| ACH2FV_RS08695 (ACH2FV_08695) | - | 1713802..1714449 (+) | 648 | WP_024427081.1 | recombinase family protein | - |
| ACH2FV_RS08700 (ACH2FV_08700) | - | 1714519..1714749 (+) | 231 | WP_024425132.1 | DUF896 domain-containing protein | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13727.41 Da Isoelectric Point: 8.5068
>NTDB_id=1066510 ACH2FV_RS08665 WP_044335941.1 1709955..1710335(+) (nucA/comI) [Bacillus safensis subsp. safensis strain KGU003]
MGTLLGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK
MGTLLGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK
Nucleotide
Download Length: 381 bp
>NTDB_id=1066510 ACH2FV_RS08665 WP_044335941.1 1709955..1710335(+) (nucA/comI) [Bacillus safensis subsp. safensis strain KGU003]
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTCGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTACAATATGTCAGTCCATCCGATAATAGGGGAGCAGGCTCATG
GGTCGGGCACCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTCGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTACAATATGTCAGTCCATCCGATAATAGGGGAGCAGGCTCATG
GGTCGGGCACCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
57.983 |
94.444 |
0.548 |