Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACH2FV_RS06835 Genome accession   NZ_CP172339
Coordinates   1337858..1338430 (+) Length   190 a.a.
NCBI ID   WP_041108810.1    Uniprot ID   -
Organism   Bacillus safensis subsp. safensis strain KGU003     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1332858..1343430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH2FV_RS06805 (ACH2FV_06805) dapD 1332973..1333683 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACH2FV_RS06810 (ACH2FV_06810) - 1333718..1334896 (+) 1179 WP_075622950.1 N-acetyldiaminopimelate deacetylase -
  ACH2FV_RS06815 (ACH2FV_06815) - 1334947..1335189 (+) 243 WP_024424725.1 YkuS family protein -
  ACH2FV_RS06820 (ACH2FV_06820) - 1335212..1336021 (-) 810 WP_076839466.1 mechanosensitive ion channel family protein -
  ACH2FV_RS06825 (ACH2FV_06825) ahpA 1336293..1336835 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  ACH2FV_RS06830 (ACH2FV_06830) - 1336918..1337376 (+) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  ACH2FV_RS06835 (ACH2FV_06835) rok 1337858..1338430 (+) 573 WP_041108810.1 transcriptional regulator Rok Regulator
  ACH2FV_RS06840 (ACH2FV_06840) - 1338478..1339395 (-) 918 WP_395894518.1 sigmaE regulated sporulation protein -
  ACH2FV_RS06845 (ACH2FV_06845) - 1339481..1340062 (+) 582 WP_076839470.1 molybdenum cofactor guanylyltransferase -
  ACH2FV_RS06850 (ACH2FV_06850) - 1340093..1341109 (+) 1017 WP_041108817.1 thiazole biosynthesis adenylyltransferase ThiF -
  ACH2FV_RS06855 (ACH2FV_06855) glp 1341119..1342396 (+) 1278 WP_395894520.1 gephyrin-like molybdotransferase Glp -
  ACH2FV_RS06860 (ACH2FV_06860) mobB 1342378..1342902 (+) 525 WP_395894522.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ACH2FV_RS06865 (ACH2FV_06865) - 1342899..1343390 (+) 492 WP_041108821.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=1066504 ACH2FV_RS06835 WP_041108810.1 1337858..1338430(+) (rok) [Bacillus safensis subsp. safensis strain KGU003]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSIGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=1066504 ACH2FV_RS06835 WP_041108810.1 1337858..1338430(+) (rok) [Bacillus safensis subsp. safensis strain KGU003]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCGTCATCTATAGGAACAGGACAGCTAAACGGTGCGCCTGTTGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment