Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACH2FV_RS06710 Genome accession   NZ_CP172339
Coordinates   1317697..1318158 (-) Length   153 a.a.
NCBI ID   WP_070325765.1    Uniprot ID   -
Organism   Bacillus safensis subsp. safensis strain KGU003     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1312697..1323158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH2FV_RS06685 (ACH2FV_06685) - 1313299..1314183 (+) 885 WP_395894512.1 cation diffusion facilitator family transporter -
  ACH2FV_RS06690 (ACH2FV_06690) - 1314248..1314400 (-) 153 WP_162842519.1 hypothetical protein -
  ACH2FV_RS06695 (ACH2FV_06695) - 1314702..1315241 (+) 540 WP_327831795.1 RDD family protein -
  ACH2FV_RS06700 (ACH2FV_06700) - 1315369..1316679 (+) 1311 WP_395894513.1 MFS transporter -
  ACH2FV_RS06705 (ACH2FV_06705) - 1316753..1317661 (+) 909 WP_024424709.1 chemotaxis protein -
  ACH2FV_RS06710 (ACH2FV_06710) kre 1317697..1318158 (-) 462 WP_070325765.1 YkyB family protein Regulator
  ACH2FV_RS06715 (ACH2FV_06715) - 1318672..1318848 (+) 177 WP_169737552.1 hypothetical protein -
  ACH2FV_RS06720 (ACH2FV_06720) - 1318976..1319893 (-) 918 WP_395894514.1 helix-turn-helix domain-containing protein -
  ACH2FV_RS06725 (ACH2FV_06725) - 1320007..1320918 (+) 912 WP_226014918.1 DMT family transporter -
  ACH2FV_RS06730 (ACH2FV_06730) - 1321055..1321270 (-) 216 WP_163115196.1 hypothetical protein -
  ACH2FV_RS06735 (ACH2FV_06735) - 1321541..1322818 (-) 1278 WP_034281582.1 MFS transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17684.23 Da        Isoelectric Point: 10.1827

>NTDB_id=1066503 ACH2FV_RS06710 WP_070325765.1 1317697..1318158(-) (kre) [Bacillus safensis subsp. safensis strain KGU003]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQTSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=1066503 ACH2FV_RS06710 WP_070325765.1 1317697..1318158(-) (kre) [Bacillus safensis subsp. safensis strain KGU003]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGCGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACGAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAACATCACATTACACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765

Multiple sequence alignment