Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   ACH2FV_RS05140 Genome accession   NZ_CP172339
Coordinates   1018401..1019351 (+) Length   316 a.a.
NCBI ID   WP_041110018.1    Uniprot ID   -
Organism   Bacillus safensis subsp. safensis strain KGU003     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1013401..1024351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH2FV_RS05115 (ACH2FV_05115) comK 1013748..1014326 (+) 579 WP_395894456.1 competence protein ComK Regulator
  ACH2FV_RS05120 (ACH2FV_05120) - 1014625..1015107 (+) 483 WP_395894457.1 hypothetical protein -
  ACH2FV_RS05125 (ACH2FV_05125) - 1015139..1016578 (-) 1440 WP_395894458.1 PLP-dependent aminotransferase family protein -
  ACH2FV_RS05130 (ACH2FV_05130) - 1016724..1017893 (+) 1170 WP_254805858.1 MFS transporter -
  ACH2FV_RS05135 (ACH2FV_05135) - 1017959..1018237 (+) 279 WP_395894459.1 barstar family protein -
  ACH2FV_RS05140 (ACH2FV_05140) ceuB 1018401..1019351 (+) 951 WP_041110018.1 ABC transporter permease Machinery gene
  ACH2FV_RS05145 (ACH2FV_05145) - 1019344..1020294 (+) 951 WP_226015068.1 iron chelate uptake ABC transporter family permease subunit -
  ACH2FV_RS05150 (ACH2FV_05150) - 1020285..1021043 (+) 759 WP_041110022.1 ABC transporter ATP-binding protein -
  ACH2FV_RS05155 (ACH2FV_05155) - 1021065..1022009 (+) 945 WP_041110024.1 siderophore ABC transporter substrate-binding protein -
  ACH2FV_RS05160 (ACH2FV_05160) - 1022148..1023101 (+) 954 WP_034282168.1 LCP family protein -
  ACH2FV_RS05165 (ACH2FV_05165) - 1023170..1023532 (-) 363 WP_041110028.1 hypothetical protein -
  ACH2FV_RS05170 (ACH2FV_05170) - 1023690..1024307 (+) 618 WP_395894460.1 TVP38/TMEM64 family protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34932.30 Da        Isoelectric Point: 9.7476

>NTDB_id=1066492 ACH2FV_RS05140 WP_041110018.1 1018401..1019351(+) (ceuB) [Bacillus safensis subsp. safensis strain KGU003]
MKLYQLSLLFVCLACISLFVGVQDLSILQLFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1066492 ACH2FV_RS05140 WP_041110018.1 1018401..1019351(+) (ceuB) [Bacillus safensis subsp. safensis strain KGU003]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTGGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTGAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGTAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTTTATGTGAGCGTTCC
ACTGTTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATTGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGGATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491


Multiple sequence alignment