Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACH2FV_RS04135 Genome accession   NZ_CP172339
Coordinates   835751..836542 (+) Length   263 a.a.
NCBI ID   WP_087976448.1    Uniprot ID   -
Organism   Bacillus safensis subsp. safensis strain KGU003     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 830751..841542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH2FV_RS04100 (ACH2FV_04100) - 830834..831382 (+) 549 WP_024425227.1 thioredoxin family protein -
  ACH2FV_RS04105 (ACH2FV_04105) - 831716..832183 (+) 468 WP_041106353.1 thiol-disulfide oxidoreductase DCC family protein -
  ACH2FV_RS04110 (ACH2FV_04110) - 832220..833476 (-) 1257 WP_041106355.1 transcriptional regulator -
  ACH2FV_RS04115 (ACH2FV_04115) - 833754..834341 (+) 588 WP_226015530.1 nitroreductase -
  ACH2FV_RS04120 (ACH2FV_04120) - 834380..834535 (-) 156 WP_041087330.1 YfhD family protein -
  ACH2FV_RS04125 (ACH2FV_04125) - 834597..834707 (-) 111 WP_017358836.1 YfhE family protein -
  ACH2FV_RS04130 (ACH2FV_04130) - 834760..835656 (-) 897 WP_202739275.1 TIGR01777 family oxidoreductase -
  ACH2FV_RS04135 (ACH2FV_04135) recX 835751..836542 (+) 792 WP_087976448.1 recombination regulator RecX Regulator
  ACH2FV_RS04140 (ACH2FV_04140) - 836546..836860 (+) 315 WP_041087336.1 YfhH family protein -
  ACH2FV_RS04145 (ACH2FV_04145) - 837088..837261 (-) 174 WP_008360604.1 YpzG family protein -
  ACH2FV_RS04150 (ACH2FV_04150) - 837287..837436 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  ACH2FV_RS04155 (ACH2FV_04155) - 837553..837825 (+) 273 WP_024425219.1 YfhJ family protein -
  ACH2FV_RS04160 (ACH2FV_04160) - 838126..839109 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30679.21 Da        Isoelectric Point: 6.6682

>NTDB_id=1066487 ACH2FV_RS04135 WP_087976448.1 835751..836542(+) (recX) [Bacillus safensis subsp. safensis strain KGU003]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYLNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDMIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1066487 ACH2FV_RS04135 WP_087976448.1 835751..836542(+) (recX) [Bacillus safensis subsp. safensis strain KGU003]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCAGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATTT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACACACCGAAAAACGAACAGCAAGGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAAGGCATAGACGATGACATGATTGAACAGGCGCTGTCGCAATACCCTGATGACTTACAGCTGGAGGAA
GCTGTAAAGCAGGTTCTCAAACTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAAAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639

Multiple sequence alignment