Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ACH2FV_RS00250 | Genome accession | NZ_CP172339 |
| Coordinates | 45805..46095 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus safensis subsp. safensis strain KGU003 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 40805..51095
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH2FV_RS00210 (ACH2FV_00210) | - | 40838..41167 (+) | 330 | WP_024425625.1 | cyclic-di-AMP receptor | - |
| ACH2FV_RS00215 (ACH2FV_00215) | - | 41180..41620 (+) | 441 | WP_395894218.1 | YaaR family protein | - |
| ACH2FV_RS00220 (ACH2FV_00220) | holB | 41632..42621 (+) | 990 | WP_024425627.1 | DNA polymerase III subunit delta' | - |
| ACH2FV_RS00225 (ACH2FV_00225) | - | 42624..43451 (+) | 828 | WP_024425628.1 | stage 0 sporulation family protein | - |
| ACH2FV_RS00230 (ACH2FV_00230) | yabA | 43466..43819 (+) | 354 | WP_024425629.1 | DNA replication initiation control protein YabA | - |
| ACH2FV_RS00235 (ACH2FV_00235) | - | 43875..44618 (+) | 744 | WP_024427205.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ACH2FV_RS00240 (ACH2FV_00240) | - | 44605..44904 (+) | 300 | WP_075621332.1 | GIY-YIG nuclease family protein | - |
| ACH2FV_RS00245 (ACH2FV_00245) | rsmI | 44879..45760 (+) | 882 | WP_024425632.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ACH2FV_RS00250 (ACH2FV_00250) | abrB | 45805..46095 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| ACH2FV_RS00255 (ACH2FV_00255) | metG | 46616..48616 (+) | 2001 | WP_041105709.1 | methionine--tRNA ligase | - |
| ACH2FV_RS00260 (ACH2FV_00260) | - | 48698..49465 (+) | 768 | WP_024425634.1 | TatD family hydrolase | - |
| ACH2FV_RS00265 (ACH2FV_00265) | - | 49710..50912 (+) | 1203 | WP_395894219.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=1066482 ACH2FV_RS00250 WP_087975202.1 45805..46095(-) (abrB) [Bacillus safensis subsp. safensis strain KGU003]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=1066482 ACH2FV_RS00250 WP_087975202.1 45805..46095(-) (abrB) [Bacillus safensis subsp. safensis strain KGU003]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCTTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAGCTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCTTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAGCTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |