Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACH6CW_RS26575 | Genome accession | NZ_CP172306 |
| Coordinates | 5658144..5658701 (+) | Length | 185 a.a. |
| NCBI ID | WP_003110422.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain pat0103 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5653144..5663701
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6CW_RS26555 | pilR | 5654420..5655757 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| ACH6CW_RS26560 | thiO | 5655803..5656897 (-) | 1095 | WP_023098084.1 | glycine oxidase ThiO | - |
| ACH6CW_RS26565 | - | 5657032..5657541 (+) | 510 | WP_023098085.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACH6CW_RS26570 | - | 5657647..5658153 (+) | 507 | WP_023098086.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACH6CW_RS26575 | pilV | 5658144..5658701 (+) | 558 | WP_003110422.1 | type 4a pilus minor pilin PilV | Machinery gene |
| ACH6CW_RS26580 | pilW | 5658698..5659522 (+) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| ACH6CW_RS26585 | pilX | 5659519..5660106 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| ACH6CW_RS26590 | pilY1 | 5660118..5663603 (+) | 3486 | WP_260551372.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20072.23 Da Isoelectric Point: 7.9204
>NTDB_id=1066178 ACH6CW_RS26575 WP_003110422.1 5658144..5658701(+) (pilV) [Pseudomonas aeruginosa strain pat0103]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1066178 ACH6CW_RS26575 WP_003110422.1 5658144..5658701(+) (pilV) [Pseudomonas aeruginosa strain pat0103]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTTGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTTGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.378 |
100 |
0.984 |