Detailed information NTG1065921

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ACHZK0_RS25280
• Genome accession: NZ_CP172246
• Coordinates: 4887615..4888964 (-)
• Length: 449 a.a.
• NCBI ID: WP_270340518.1
• Uniprot ID: -
• Organism: Bacillus sp. 3G2
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4882615..4893964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHZK0_RS25260 (ACHZK0_25260)	secA	4882942..4885449 (-)	2508	WP_395760996.1	preprotein translocase subunit SecA	-
ACHZK0_RS25265 (ACHZK0_25265)	hpf	4885724..4886266 (-)	543	WP_000671193.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ACHZK0_RS25270 (ACHZK0_25270)	cspC	4886587..4886784 (-)	198	WP_001990088.1	cold shock protein CspC	-
ACHZK0_RS25275 (ACHZK0_25275)	-	4886911..4887615 (-)	705	WP_395760997.1	ComF family protein	-
ACHZK0_RS25280 (ACHZK0_25280)	comFA	4887615..4888964 (-)	1350	WP_270340518.1	ATP-dependent helicase ComFA	Machinery gene
ACHZK0_RS25285 (ACHZK0_25285)	-	4889092..4890387 (-)	1296	WP_395760998.1	NlpC/P60 family protein	-
ACHZK0_RS25290 (ACHZK0_25290)	-	4890639..4890953 (-)	315	WP_000400858.1	winged helix-turn-helix transcriptional regulator	-
ACHZK0_RS25295 (ACHZK0_25295)	-	4891126..4891968 (-)	843	WP_000844775.1	DegV family protein	-
ACHZK0_RS25300 (ACHZK0_25300)	-	4892208..4892843 (+)	636	WP_073517111.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 50866.74 Da
• Isoelectric Point: 9.7935

>NTDB_id=1065921 ACHZK0_RS25280 WP_270340518.1 4887615..4888964(-) (comFA) [Bacillus sp. 3G2]
MLAGKQLLLEELSSDLRRELSGLKKMGEIVCIQGVTKKVSKYICQRCGNIEQRLFASFLCKRCSKVCAYCRKCITMGRVS
ECAVLVRGIAERKGEKGLNSLQWNGTLSIGQELAAQGVIEAIKQKDSFFIWAVCGAGKTEMLFYGIAEALQKGERVCIAT
PRTDVVLELAPRLQEVFPNINVAALYGGSADREKDAALVVATTHQLLRYYRAFHVMIVDEMDAFPYHADQMLQYAVQQAM
KEKAAHIYLTATPDKKWKHNLRKGKQKGIIVSGRYHRHPLPVPQFCWCGNWKKSLHHKRIPRVLLQWLKMYVSKKYPVFL
FVPHVRYIEEMSLLLKTLDHRIDGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEIVYFHCGKTEAMVRAKKHIQSMNKKAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=1065921 ACHZK0_RS25280 WP_270340518.1 4887615..4888964(-) (comFA) [Bacillus sp. 3G2]
ATGCTTGCTGGAAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACGGAGAGAATTAAGTGGTTTGAAAAAGATGGG
AGAGATCGTATGTATACAAGGCGTAACAAAAAAGGTTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAACGAC
TATTTGCATCATTTTTATGTAAAAGGTGCAGTAAAGTGTGCGCGTATTGCCGGAAGTGTATCACGATGGGGAGAGTTAGT
GAATGTGCTGTACTCGTTCGTGGGATCGCTGAAAGAAAAGGTGAAAAAGGTTTAAATTCGTTACAGTGGAACGGAACTTT
GTCTATTGGTCAAGAGTTGGCGGCGCAAGGTGTTATAGAAGCTATTAAGCAGAAAGACTCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATTGCAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATAGCAACG
CCAAGAACAGACGTTGTACTGGAATTAGCACCGAGATTACAAGAAGTGTTTCCTAATATAAATGTAGCTGCTTTATACGG
AGGGAGTGCAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACGCATCAATTGTTACGTTATTATAGAGCGTTTC
ATGTCATGATTGTAGATGAGATGGATGCCTTCCCGTATCATGCAGATCAAATGTTACAGTATGCAGTGCAACAAGCGATG
AAAGAGAAAGCGGCACATATTTATTTAACAGCAACTCCTGATAAAAAGTGGAAGCATAATCTCAGAAAGGGGAAGCAAAA
AGGTATCATTGTCTCAGGACGATACCATCGTCATCCGTTACCAGTTCCTCAATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAGAATTCCTCGAGTGTTACTACAATGGTTAAAAATGTACGTAAGCAAAAAGTATCCCGTTTTTTTA
TTTGTTCCTCATGTGAGATATATAGAAGAAATGAGTCTGTTATTGAAAACCTTGGATCATAGAATCGACGGTGTACATGC
AGAAGATCCAATGAGAAAGGAAAAGGTAGCGGCTTTCAGAAAGGGAGAAATTCCGTTATTAGTTACGACGACAATTTTAG
AGAGAGGAGTAACTGTGAAGAATTTACAAGTTGCGGTGTTAGGGGCAGAAGAAGAAATCTTTTCGGAAAGTGCACTCGTA
CAAATTGCAGGTCGAGCAGGTCGTAGTTTTGAAGAACCTTATGGCGAGATTGTTTATTTTCATTGCGGTAAGACAGAGGC
GATGGTACGCGCGAAAAAGCATATTCAAAGTATGAACAAAAAGGCAAAAGAACAAGGATTAATCGATTGA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (110-254)

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.691	96.659	0.49
comFA	Latilactobacillus sakei subsp. sakei 23K	40.704	88.641	0.361