Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   ACHZK0_RS19395 Genome accession   NZ_CP172246
Coordinates   3809953..3810387 (-) Length   144 a.a.
NCBI ID   WP_262743308.1    Uniprot ID   -
Organism   Bacillus sp. 3G2     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3804953..3815387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHZK0_RS19375 (ACHZK0_19375) - 3805373..3805930 (+) 558 WP_262743311.1 PadR family transcriptional regulator -
  ACHZK0_RS19380 (ACHZK0_19380) - 3806117..3806548 (-) 432 WP_270606043.1 NUDIX hydrolase -
  ACHZK0_RS19385 (ACHZK0_19385) metE 3807202..3809490 (+) 2289 WP_262743309.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ACHZK0_RS19390 (ACHZK0_19390) comJ 3809527..3809916 (-) 390 WP_071721316.1 competence protein ComJ -
  ACHZK0_RS19395 (ACHZK0_19395) nucA/comI 3809953..3810387 (-) 435 WP_262743308.1 DNA-entry nuclease Machinery gene
  ACHZK0_RS19400 (ACHZK0_19400) - 3810625..3811374 (+) 750 WP_061678303.1 DUF3967 domain-containing protein -
  ACHZK0_RS19405 (ACHZK0_19405) kinB 3811428..3812702 (-) 1275 WP_270606045.1 sporulation sensor histidine kinase KinB -
  ACHZK0_RS19410 (ACHZK0_19410) - 3813012..3813212 (+) 201 WP_000929281.1 hypothetical protein -
  ACHZK0_RS19415 (ACHZK0_19415) - 3813336..3814499 (+) 1164 WP_262743228.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16010.33 Da        Isoelectric Point: 7.8613

>NTDB_id=1065906 ACHZK0_RS19395 WP_262743308.1 3809953..3810387(-) (nucA/comI) [Bacillus sp. 3G2]
MKQLKGIIISIIAILSIVVAVYEVLVPEETSIQKTNAYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=1065906 ACHZK0_RS19395 WP_262743308.1 3809953..3810387(-) (nucA/comI) [Bacillus sp. 3G2]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTGTAGTAGCGGTTTATGAAGTACTTGTTCC
AGAGGAGACAAGTATCCAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCGAAAGAGCGATATCCAGAGACAGGGA
AACATATTACGGATGCTATAAAAGAAGGACATTCAGAAGTTTGTACAATCGACCGTGGCGGTGCTGCGGATAGAAGAAAA
TTATCGTTAGCTCCATACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCGGCAGATAACCGCGGGGCAGGGTCTTGGGTAGGAAATAAGTTAGATAAATACC
CAGATGGTACGCGTGTGAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

71.171

77.083

0.549

Multiple sequence alignment