Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACHZK0_RS19340 Genome accession   NZ_CP172246
Coordinates   3798372..3798830 (+) Length   152 a.a.
NCBI ID   WP_000804861.1    Uniprot ID   A0A164Q4K6
Organism   Bacillus sp. 3G2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3793372..3803830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHZK0_RS19325 (ACHZK0_19325) - 3794027..3794263 (+) 237 WP_395760807.1 hypothetical protein -
  ACHZK0_RS19330 (ACHZK0_19330) - 3794440..3796548 (-) 2109 WP_097816912.1 polyphosphate kinase -
  ACHZK0_RS19335 (ACHZK0_19335) ppx 3796656..3798194 (-) 1539 WP_395760808.1 exopolyphosphatase -
  ACHZK0_RS19340 (ACHZK0_19340) kre 3798372..3798830 (+) 459 WP_000804861.1 YkyB family protein Regulator
  ACHZK0_RS19345 (ACHZK0_19345) - 3798862..3799524 (-) 663 WP_073516289.1 YkyA family protein -
  ACHZK0_RS19350 (ACHZK0_19350) - 3800184..3800825 (-) 642 WP_063260474.1 diguanylate cyclase domain-containing protein -
  ACHZK0_RS19355 (ACHZK0_19355) - 3800990..3801253 (+) 264 WP_395760809.1 hypothetical protein -
  ACHZK0_RS19360 (ACHZK0_19360) tnpB 3801231..3802358 (-) 1128 WP_395760810.1 IS200/IS605 family element RNA-guided endonuclease TnpB -
  ACHZK0_RS19365 (ACHZK0_19365) - 3802819..3803319 (-) 501 WP_063260475.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17770.49 Da        Isoelectric Point: 10.6793

>NTDB_id=1065905 ACHZK0_RS19340 WP_000804861.1 3798372..3798830(+) (kre) [Bacillus sp. 3G2]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTNLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=1065905 ACHZK0_RS19340 WP_000804861.1 3798372..3798830(+) (kre) [Bacillus sp. 3G2]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATATTGGTTAAAAAAGACGGCTTTAGAACGCTTAATTGCTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTTTCTAGAAATCCACGCTTTAGCCAACAACAATCGGATGTTCTTATCCGTTTA
GGTGATTATTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAAACTTATCTTTAACAGTAGCAAAAAAGACACTTCAAGATTATATTGGTCCTGAAGCACTGAAAC
AAGAGAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A164Q4K6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment