Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACH19Q_RS14875 | Genome accession | NZ_CP172236 |
| Coordinates | 3128917..3130056 (+) | Length | 379 a.a. |
| NCBI ID | WP_020831131.1 | Uniprot ID | - |
| Organism | Ralstonia pseudosolanacearum strain UMN24-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3123917..3135056
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH19Q_RS14850 (ACH19Q_14850) | - | 3124279..3124527 (-) | 249 | WP_011000353.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| ACH19Q_RS14855 (ACH19Q_14855) | coaD | 3124578..3125084 (-) | 507 | WP_003262550.1 | pantetheine-phosphate adenylyltransferase | - |
| ACH19Q_RS14860 (ACH19Q_14860) | rsmD | 3125280..3125927 (-) | 648 | WP_016724254.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| ACH19Q_RS14865 (ACH19Q_14865) | - | 3126008..3127351 (-) | 1344 | WP_011000351.1 | M16 family metallopeptidase | - |
| ACH19Q_RS14870 (ACH19Q_14870) | - | 3127351..3128856 (-) | 1506 | WP_011000350.1 | M16 family metallopeptidase | - |
| ACH19Q_RS14875 (ACH19Q_14875) | pilA | 3128917..3130056 (+) | 1140 | WP_020831131.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| ACH19Q_RS14880 (ACH19Q_14880) | - | 3130053..3130691 (-) | 639 | WP_201016222.1 | LysE/ArgO family amino acid transporter | - |
| ACH19Q_RS14885 (ACH19Q_14885) | maiA | 3130688..3131338 (-) | 651 | WP_058907459.1 | maleylacetoacetate isomerase | - |
| ACH19Q_RS14890 (ACH19Q_14890) | - | 3131342..3132043 (-) | 702 | WP_011000346.1 | fumarylacetoacetate hydrolase family protein | - |
| ACH19Q_RS14895 (ACH19Q_14895) | - | 3132191..3132817 (+) | 627 | WP_038938076.1 | ANTAR domain-containing response regulator | - |
| ACH19Q_RS14900 (ACH19Q_14900) | - | 3133094..3134356 (+) | 1263 | WP_197368343.1 | CmpA/NrtA family ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 379 a.a. Molecular weight: 40157.41 Da Isoelectric Point: 5.8101
>NTDB_id=1065832 ACH19Q_RS14875 WP_020831131.1 3128917..3130056(+) (pilA) [Ralstonia pseudosolanacearum strain UMN24-1]
MFSFWKKRKAEPQPAAELAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
MFSFWKKRKAEPQPAAELAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
Nucleotide
Download Length: 1140 bp
>NTDB_id=1065832 ACH19Q_RS14875 WP_020831131.1 3128917..3130056(+) (pilA) [Ralstonia pseudosolanacearum strain UMN24-1]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACTGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCGCGCAAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGT
GAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTG
CTCATCGAGTTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCG
CCGACGCGCTGCTGGGCTAA
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACTGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCGCGCAAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGT
GAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTG
CTCATCGAGTTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCG
CCGACGCGCTGCTGGGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.163 |
100 |
0.573 |