Detailed information NTG0106524

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: AABA16_RS08635
• Genome accession: NZ_AP028610
• Coordinates: 1691742..1692809 (-)
• Length: 355 a.a.
• NCBI ID: WP_000159554.1
• Uniprot ID: A0A062WMA1
• Organism: Streptococcus pneumoniae strain Sep5
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1686742..1697809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA16_RS08610 (TKY124516_17020)	treR	1686914..1687624 (+)	711	WP_000760673.1	trehalose operon repressor	Regulator
AABA16_RS08615 (TKY124516_17030)	-	1687657..1688460 (-)	804	WP_000202630.1	ATP-binding cassette domain-containing protein	-
AABA16_RS08620 (TKY124516_17040)	-	1688473..1689366 (-)	894	WP_001012092.1	ABC transporter permease	-
AABA16_RS08625 (TKY124516_17050)	-	1689378..1690315 (-)	938	Protein_1707	ABC transporter substrate-binding protein	-
AABA16_RS08630 (TKY124516_17060)	amiF	1690805..1691731 (-)	927	WP_001291293.1	ATP-binding cassette domain-containing protein	Regulator
AABA16_RS08635 (TKY124516_17070)	amiE	1691742..1692809 (-)	1068	WP_000159554.1	oligopeptide/dipeptide ABC transporter ATP-binding protein	Regulator
AABA16_RS08640 (TKY124516_17080)	amiD	1692818..1693744 (-)	927	WP_000103700.1	oligopeptide ABC transporter permease OppC	Regulator
AABA16_RS08645 (TKY124516_17090)	amiC	1693744..1695240 (-)	1497	WP_000759903.1	ABC transporter permease	Regulator
AABA16_RS08650 (TKY124516_17100)	amiA3	1695307..1697286 (-)	1980	WP_000742232.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39490.09 Da
• Isoelectric Point: 4.8727

>NTDB_id=106524 AABA16_RS08635 WP_000159554.1 1691742..1692809(-) (amiE) [Streptococcus pneumoniae strain Sep5]
MTKEKNVILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTFTGMLEENGRIAQGSIDYRGQDL
TALSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAKEAKELAIDYMNKVGIPDADRRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGDLYSIPGTPPSLYTDLKGDAFALRSDYAMQIDFEQKAPQFSVSETHWAK
TWLLHEDAPKVEKPAVIANLHDKIREKMGFAHLAD

Nucleotide

• Length: 1068 bp

>NTDB_id=106524 AABA16_RS08635 WP_000159554.1 1691742..1692809(-) (amiE) [Streptococcus pneumoniae strain Sep5]
ATGACAAAAGAAAAAAATGTAATTTTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTATTGACAGC
CATTCGCGGCGTTTCCCTTGAACTAGTCGAAGGAGAAGTATTAGCCTTGGTAGGTGAGTCAGGATCAGGTAAATCTGTTT
TGACAAAGACCTTCACAGGTATGCTCGAAGAAAATGGTCGCATTGCCCAAGGTAGTATTGACTACCGTGGTCAGGACTTG
ACAGCTTTATCTTCTCACAAGGATTGGGAACAAATTCGTGGTGCTAAGATTGCGACTATCTTCCAGGACCCAATGACTAG
TTTGGACCCCATTAAAACAATTGGTAGTCAGATTACAGAAGTTATTGTAAAACACCAAGGAAAAACAGCTAAAGAAGCGA
AAGAATTGGCCATTGACTACATGAATAAGGTTGGCATTCCAGACGCAGATAGACGTTTTAATGAATACCCATTCCAATAT
TCTGGAGGAATGCGTCAACGTATCGTTATTGCGATTGCCCTTGCCTGCCGACCTGATGTCTTGATCTGTGATGAGCCAAC
AACTGCCTTGGATGTAACTATTCAAGCTCAGATTATTGATTTGCTAAAATCTTTACAAAACGAGTATCATTTCACAACAA
TCTTTATTACCCACGACCTTGGTGTGGTGGCAAGTATTGCGGATAAGGTAGCGGTTATGTATGCAGGAGAAATCGTTGAG
TATGGAACGGTTGAGGAAGTCTTCTATGACCCTCGCCATCCATATACATGGAGTCTCTTGTCTAGCTTGCCTCAGCTTGC
TGATGATAAAGGGGATCTTTACTCAATCCCAGGAACACCTCCGTCACTTTATACTGACCTGAAAGGGGATGCTTTTGCCT
TGCGTTCTGACTACGCAATGCAGATTGACTTCGAACAAAAAGCTCCTCAATTCTCAGTATCAGAGACACATTGGGCTAAA
ACTTGGCTTCTTCATGAGGATGCTCCAAAAGTAGAAAAACCAGCTGTGATTGCAAATCTCCATGATAAGATCCGTGAAAA
AATGGGATTTGCCCATCTGGCTGACTAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-301)

• ABC transporter (ABC_tran) (29-187)

3D structure

• AlphaFold DB: A0A062WMA1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	88.169	100	0.882
amiE	Streptococcus thermophilus LMG 18311	86.479	100	0.865
amiE	Streptococcus thermophilus LMD-9	86.479	100	0.865
oppD	Streptococcus mutans UA159	54.545	99.155	0.541