Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACHWYH_RS07245 Genome accession   NZ_CP172084
Coordinates   1448167..1448820 (+) Length   217 a.a.
NCBI ID   WP_112103393.1    Uniprot ID   -
Organism   Haemophilus influenzae strain GA81666     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1443167..1453820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHWYH_RS07220 - 1443587..1444591 (-) 1005 WP_112103391.1 ornithine carbamoyltransferase -
  ACHWYH_RS07225 - 1444993..1445811 (+) 819 WP_112103392.1 Cof-type HAD-IIB family hydrolase -
  ACHWYH_RS07230 crcB 1445811..1446197 (+) 387 WP_105881409.1 fluoride efflux transporter CrcB -
  ACHWYH_RS07235 recX 1446194..1446652 (-) 459 WP_005651075.1 recombination regulator RecX -
  ACHWYH_RS07240 recA 1446731..1447795 (-) 1065 WP_005654959.1 recombinase RecA Machinery gene
  ACHWYH_RS07245 sxy/tfoX 1448167..1448820 (+) 654 WP_112103393.1 DNA transformation protein TfoX Regulator

Sequence

Protein


Download         Length: 217 a.a.        Molecular weight: 24958.35 Da        Isoelectric Point: 9.9175

>NTDB_id=1065064 ACHWYH_RS07245 WP_112103393.1 1448167..1448820(+) (sxy/tfoX) [Haemophilus influenzae strain GA81666]
MNIKDEHIDSVCSLLDQLVGNVSFKNLFTGYGLFHKEETMFAIWQNKKLYLRGEGVLAIQLTKLGCEPFTTNELNKRFVL
SQYYALSDQILRSNRLCRKLIILSIKQILEQKLECTLRKLNRLKDLPNLTIKHERALIKVGITNVAMLREIGAENALVEL
KKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKKLNEVLRKNGLKGYIKLDDE

Nucleotide


Download         Length: 654 bp        

>NTDB_id=1065064 ACHWYH_RS07245 WP_112103393.1 1448167..1448820(+) (sxy/tfoX) [Haemophilus influenzae strain GA81666]
ATGAATATAAAGGATGAGCACATAGATAGCGTTTGCTCCTTGTTAGATCAGTTAGTAGGAAATGTTTCCTTTAAAAATCT
TTTTACTGGTTACGGTTTGTTTCACAAGGAAGAGACAATGTTTGCCATTTGGCAAAATAAAAAACTTTATTTACGCGGTG
AGGGTGTTCTCGCAATTCAATTAACTAAATTAGGTTGTGAACCTTTTACAACGAATGAATTGAATAAGCGGTTTGTGCTT
TCACAATATTATGCACTTTCTGATCAGATTTTACGTAGTAATAGATTGTGTAGAAAATTGATTATTCTTTCTATTAAGCA
GATTCTTGAGCAGAAGCTAGAATGTACGTTAAGAAAATTGAATCGATTAAAGGATTTACCCAATTTAACGATTAAACATG
AAAGAGCTTTAATAAAAGTTGGTATTACAAATGTTGCGATGCTAAGAGAGATTGGCGCAGAAAATGCATTGGTGGAATTA
AAGAAAAGTGGCAGTGGTGCTACGCTTGATTTTTATTGGAAATTAGTATGTGCTTTGCAAAATAAAAATAGTCAGATGTT
AAGTCAAGCTGAAAAAGAGCGTTTATTGAAGAAATTAAACGAAGTTTTGAGAAAAAATGGCTTAAAAGGCTATATAAAAT
TAGATGATGAATAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-107)

TfoX C-terminal domain (TfoX_C)

(121-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Haemophilus influenzae Rd KW20

99.078

100

0.991

Multiple sequence alignment