Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   ACHWYG_RS07735 Genome accession   NZ_CP172082
Coordinates   1535888..1536184 (-) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae strain GA54827     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1530888..1541184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHWYG_RS07710 - 1531118..1531876 (-) 759 WP_061659696.1 DUF3800 domain-containing protein -
  ACHWYG_RS07715 aroE 1531888..1532694 (-) 807 WP_118804420.1 shikimate dehydrogenase -
  ACHWYG_RS07720 - 1532698..1533249 (-) 552 WP_077643737.1 Sua5/YciO/YrdC/YwlC family protein -
  ACHWYG_RS07725 - 1533265..1533801 (-) 537 WP_077643738.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  ACHWYG_RS07730 - 1533811..1535727 (-) 1917 WP_103746093.1 ABC transporter ATP-binding protein -
  ACHWYG_RS07735 HI0659 1535888..1536184 (-) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  ACHWYG_RS07740 - 1536177..1536536 (-) 360 WP_005694481.1 type II toxin-antitoxin system RelE/ParE family toxin -
  ACHWYG_RS07745 - 1536806..1539058 (-) 2253 WP_395483082.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  ACHWYG_RS07750 - 1539266..1539652 (-) 387 Protein_1478 TonB-dependent receptor plug domain-containing protein -
  ACHWYG_RS07755 - 1539601..1539711 (-) 111 Protein_1479 PT domain-containing protein -
  ACHWYG_RS07760 - 1539669..1539839 (-) 171 Protein_1480 PT domain-containing protein -
  ACHWYG_RS07765 - 1540278..1540355 (+) 78 Protein_1481 ABC transporter -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=1065030 ACHWYG_RS07735 WP_005650837.1 1535888..1536184(-) (HI0659) [Haemophilus influenzae strain GA54827]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=1065030 ACHWYG_RS07735 WP_005650837.1 1535888..1536184(-) (HI0659) [Haemophilus influenzae strain GA54827]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAGCTTGAAACGTTGTTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTTCCTCTAAGGGTAAAAAATGCCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1

Multiple sequence alignment