Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACHWYG_RS07300 Genome accession   NZ_CP172082
Coordinates   1453731..1454384 (+) Length   217 a.a.
NCBI ID   WP_112103393.1    Uniprot ID   -
Organism   Haemophilus influenzae strain GA54827     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1448731..1459384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHWYG_RS07275 - 1449150..1450154 (-) 1005 WP_116938273.1 ornithine carbamoyltransferase -
  ACHWYG_RS07280 - 1450556..1451374 (+) 819 WP_116938274.1 Cof-type HAD-IIB family hydrolase -
  ACHWYG_RS07285 crcB 1451374..1451760 (+) 387 WP_005692779.1 fluoride efflux transporter CrcB -
  ACHWYG_RS07290 recX 1451757..1452215 (-) 459 WP_116938275.1 recombination regulator RecX -
  ACHWYG_RS07295 recA 1452295..1453359 (-) 1065 WP_005654959.1 recombinase RecA Machinery gene
  ACHWYG_RS07300 sxy/tfoX 1453731..1454384 (+) 654 WP_112103393.1 DNA transformation protein TfoX Regulator

Sequence

Protein


Download         Length: 217 a.a.        Molecular weight: 24958.35 Da        Isoelectric Point: 9.9175

>NTDB_id=1065029 ACHWYG_RS07300 WP_112103393.1 1453731..1454384(+) (sxy/tfoX) [Haemophilus influenzae strain GA54827]
MNIKDEHIDSVCSLLDQLVGNVSFKNLFTGYGLFHKEETMFAIWQNKKLYLRGEGVLAIQLTKLGCEPFTTNELNKRFVL
SQYYALSDQILRSNRLCRKLIILSIKQILEQKLECTLRKLNRLKDLPNLTIKHERALIKVGITNVAMLREIGAENALVEL
KKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKKLNEVLRKNGLKGYIKLDDE

Nucleotide


Download         Length: 654 bp        

>NTDB_id=1065029 ACHWYG_RS07300 WP_112103393.1 1453731..1454384(+) (sxy/tfoX) [Haemophilus influenzae strain GA54827]
ATGAATATAAAGGATGAGCACATAGATAGCGTTTGCTCCTTGTTAGATCAGTTAGTAGGAAATGTTTCCTTTAAAAATCT
TTTTACTGGTTACGGTTTGTTTCACAAGGAAGAGACAATGTTTGCCATTTGGCAAAATAAAAAACTTTATTTACGCGGTG
AGGGTGTTCTCGCAATTCAATTAACTAAATTAGGTTGTGAACCTTTTACAACGAATGAATTGAATAAGCGGTTTGTGCTT
TCACAATATTATGCACTTTCTGATCAGATTTTACGTAGTAATAGATTGTGTAGAAAATTGATTATTCTTTCTATTAAGCA
GATTCTTGAGCAGAAGCTAGAATGTACGTTAAGAAAATTGAATCGATTAAAGGATTTACCCAATTTAACGATTAAACATG
AAAGAGCTTTAATAAAAGTTGGTATTACAAATGTTGCGATGCTAAGAGAGATTGGCGCAGAAAATGCATTGGTGGAATTA
AAGAAAAGTGGCAGTGGTGCTACGCTTGATTTTTATTGGAAATTAGTATGTGCTTTGCAAAATAAAAATAGTCAGATGTT
AAGTCAAGCTGAAAAAGAGCGTTTATTGAAGAAATTAAACGAAGTTTTGAGAAAAAATGGCTTAAAAGGCTATATAAAAT
TAGATGATGAATAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-107)

TfoX C-terminal domain (TfoX_C)

(121-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Haemophilus influenzae Rd KW20

99.078

100

0.991

Multiple sequence alignment