Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACHOZJ_RS07635 Genome accession   NZ_CP172059
Coordinates   1645884..1646510 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain EC5927     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1640884..1651510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHOZJ_RS07615 (ACHOZJ_07615) - 1641283..1643043 (-) 1761 WP_003858160.1 Lon protease family protein -
  ACHOZJ_RS07620 (ACHOZJ_07620) matP 1643230..1643682 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  ACHOZJ_RS07625 (ACHOZJ_07625) ompA 1643748..1644800 (-) 1053 WP_003858156.1 porin OmpA -
  ACHOZJ_RS07630 (ACHOZJ_07630) sulA 1645157..1645666 (-) 510 WP_395478491.1 SOS-induced cell division inhibitor SulA -
  ACHOZJ_RS07635 (ACHOZJ_07635) sxy/tfoX 1645884..1646510 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  ACHOZJ_RS07640 (ACHOZJ_07640) yccS 1646467..1648629 (-) 2163 WP_003858151.1 YccS family putative transporter -
  ACHOZJ_RS07645 (ACHOZJ_07645) - 1648648..1649094 (-) 447 WP_003858149.1 YccF domain-containing protein -
  ACHOZJ_RS07650 (ACHOZJ_07650) helD 1649217..1651271 (+) 2055 WP_058663369.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=1064983 ACHOZJ_RS07635 WP_023315767.1 1645884..1646510(+) (sxy/tfoX) [Enterobacter hormaechei strain EC5927]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1064983 ACHOZJ_RS07635 WP_023315767.1 1645884..1646510(+) (sxy/tfoX) [Enterobacter hormaechei strain EC5927]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572


Multiple sequence alignment