Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACHKST_RS07170 Genome accession   NZ_CP172011
Coordinates   1354306..1354902 (+) Length   198 a.a.
NCBI ID   WP_101562971.1    Uniprot ID   -
Organism   Bacillus velezensis strain Bv.g1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1349306..1359902
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHKST_RS07140 - 1349521..1349976 (+) 456 WP_071391903.1 flavodoxin -
  ACHKST_RS07145 dapD 1350058..1350768 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACHKST_RS07150 - 1350839..1351963 (+) 1125 WP_101562970.1 N-acetyldiaminopimelate deacetylase -
  ACHKST_RS07155 - 1352024..1352269 (+) 246 WP_003154596.1 YkuS family protein -
  ACHKST_RS07160 - 1352303..1353109 (-) 807 WP_060386912.1 mechanosensitive ion channel family protein -
  ACHKST_RS07165 - 1353396..1353854 (+) 459 WP_071391901.1 redoxin domain-containing protein -
  ACHKST_RS07170 rok 1354306..1354902 (+) 597 WP_101562971.1 transcriptional regulator Rok Regulator
  ACHKST_RS07175 - 1354923..1355915 (-) 993 WP_069473386.1 sporulation protein -
  ACHKST_RS07180 - 1356061..1356663 (+) 603 WP_071391898.1 molybdenum cofactor guanylyltransferase -
  ACHKST_RS07185 - 1356715..1357734 (+) 1020 WP_071391897.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACHKST_RS07190 glp 1357752..1359044 (+) 1293 WP_071391896.1 gephyrin-like molybdotransferase Glp -
  ACHKST_RS07195 mobB 1359005..1359526 (+) 522 WP_041482361.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22641.65 Da        Isoelectric Point: 9.4832

>NTDB_id=1064825 ACHKST_RS07170 WP_101562971.1 1354306..1354902(+) (rok) [Bacillus velezensis strain Bv.g1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYEKLRELDNTGSLSDTKKEFRPEKKNDSLPVLAELAAQEMRSYQKPQ
TQPQSSQQQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1064825 ACHKST_RS07170 WP_101562971.1 1354306..1354902(+) (rok) [Bacillus velezensis strain Bv.g1]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGAAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAATGACTCCCTCCCGGTACTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCAGCAGATGCAGTCTATTACGTCTCTTCCCGCAGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCGAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

87.113

97.98

0.854

Multiple sequence alignment