Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACHKST_RS04380 Genome accession   NZ_CP172011
Coordinates   845476..846267 (+) Length   263 a.a.
NCBI ID   WP_003155502.1    Uniprot ID   A0A9Q3QM78
Organism   Bacillus velezensis strain Bv.g1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 840476..851267
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHKST_RS04355 - 842471..843355 (+) 885 WP_025650233.1 PhzF family phenazine biosynthesis isomerase -
  ACHKST_RS04360 - 843432..844016 (+) 585 WP_007408549.1 nitroreductase -
  ACHKST_RS04365 - 844055..844246 (-) 192 WP_101562834.1 YfhD family protein -
  ACHKST_RS04370 - 844317..844427 (-) 111 WP_003155504.1 YfhE family protein -
  ACHKST_RS04375 - 844485..845384 (-) 900 WP_101562835.1 TIGR01777 family oxidoreductase -
  ACHKST_RS04380 recX 845476..846267 (+) 792 WP_003155502.1 recombination regulator RecX Regulator
  ACHKST_RS04385 - 846274..846585 (+) 312 WP_025650230.1 YfhH family protein -
  ACHKST_RS04390 - 846732..847925 (+) 1194 WP_025650229.1 MFS transporter -
  ACHKST_RS04395 - 847965..848354 (-) 390 WP_101562836.1 DUF2606 family protein -
  ACHKST_RS04400 - 848317..849228 (-) 912 WP_003155497.1 serine protease -
  ACHKST_RS04405 - 849373..849525 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  ACHKST_RS04410 - 849649..849918 (+) 270 WP_003155492.1 YfhJ family protein -
  ACHKST_RS04415 - 850050..850577 (+) 528 WP_070081523.1 SH3 domain-containing protein -
  ACHKST_RS04420 - 850663..850998 (+) 336 WP_101562837.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30978.18 Da        Isoelectric Point: 6.2735

>NTDB_id=1064808 ACHKST_RS04380 WP_003155502.1 845476..846267(+) (recX) [Bacillus velezensis strain Bv.g1]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1064808 ACHKST_RS04380 WP_003155502.1 845476..846267(+) (recX) [Bacillus velezensis strain Bv.g1]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTACTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGTGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGCGCGTTTACATTTGATGAGCAGATTCAAGAA
GCGCTGAAACATATCGGCAAAATCCTCAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.087

100

0.791

Multiple sequence alignment