Detailed information NTG1064794

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACHG0T_RS36080
• Genome accession: NZ_CP172007
• Coordinates: 3230066..3231220 (+)
• Length: 384 a.a.
• NCBI ID: WP_039346088.1
• Uniprot ID: -
• Organism: Burkholderia contaminans strain PCR-C_Y9
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3225066..3236220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHG0T_RS36050 (ACHG0T_36050)	-	3225709..3226314 (+)	606	WP_039346059.1	50S ribosomal protein L25/general stress protein Ctc	-
ACHG0T_RS36055 (ACHG0T_36055)	pth	3226436..3227035 (+)	600	WP_039346068.1	aminoacyl-tRNA hydrolase	-
ACHG0T_RS36060 (ACHG0T_36060)	hisC	3227150..3228217 (+)	1068	WP_039346080.1	histidinol-phosphate transaminase	-
ACHG0T_RS36065 (ACHG0T_36065)	-	3228301..3228567 (-)	267	WP_039346082.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACHG0T_RS36070 (ACHG0T_36070)	coaD	3228627..3229124 (-)	498	WP_039346084.1	pantetheine-phosphate adenylyltransferase	-
ACHG0T_RS36075 (ACHG0T_36075)	rsmD	3229236..3229850 (-)	615	WP_039346086.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACHG0T_RS36080 (ACHG0T_36080)	pilA	3230066..3231220 (+)	1155	WP_039346088.1	signal recognition particle-docking protein FtsY	Machinery gene
ACHG0T_RS36085 (ACHG0T_36085)	maiA	3231306..3231950 (-)	645	WP_039346506.1	maleylacetoacetate isomerase	-
ACHG0T_RS36090 (ACHG0T_36090)	ybiB	3232139..3233113 (+)	975	WP_039346089.1	DNA-binding protein YbiB	-
ACHG0T_RS36095 (ACHG0T_36095)	leuA	3233494..3235140 (+)	1647	WP_039346090.1	2-isopropylmalate synthase	-
ACHG0T_RS36100 (ACHG0T_36100)	-	3235284..3235667 (-)	384	WP_039346091.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40942.88 Da
• Isoelectric Point: 4.7979

>NTDB_id=1064794 ACHG0T_RS36080 WP_039346088.1 3230066..3231220(+) (pilA) [Burkholderia contaminans strain PCR-C_Y9]
MFSFFKRFKKTQEPDPAESQSADAQQTDEPSDAPAVEAPPVADVPQAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDATAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRTGRLTDPQQVKA
ALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1155 bp

>NTDB_id=1064794 ACHG0T_RS36080 WP_039346088.1 3230066..3231220(+) (pilA) [Burkholderia contaminans strain PCR-C_Y9]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAAC
GGACGAGCCGTCCGACGCGCCCGCGGTCGAGGCCCCGCCTGTGGCCGACGTGCCGCAAGCGCCCGCACAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTCCCGCCGCCG
CTGCAGGACGCCACCGCGAAGAAATCGTGGCTTGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGCTCGAGCATCACCGG
CGTGTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAGTACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCACCGGCCGCCTGACCGACCCGCAGCAGGTGAAGGCC
GCGCTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCACCGGCGTGAACGGCGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCAGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCAGCGCGCGCGCGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTCAAGGCATTCGACGACGCGCTCGGCCTCACCGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCTGCGATCGCGCGTCAGCGTCCGGTGCCGGTCTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCA
GCGCGGTCGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

• SRP54-type protein, GTPase domain (SRP54) (185-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.606	100	0.581