Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACHMXE_RS15725 Genome accession   NZ_CP172004
Coordinates   734261..734659 (+) Length   132 a.a.
NCBI ID   WP_057590817.1    Uniprot ID   A0A2E9BVN5
Organism   Variovorax sp. UC122_21     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 729261..739659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHMXE_RS15705 (ACHMXE_15720) - 730215..731615 (+) 1401 WP_395350121.1 amidase family protein -
  ACHMXE_RS15710 (ACHMXE_15725) hemL 731625..732911 (-) 1287 WP_395350122.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ACHMXE_RS15715 (ACHMXE_15730) - 732932..733897 (-) 966 WP_209543676.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  ACHMXE_RS15720 (ACHMXE_15735) - 734009..734179 (+) 171 WP_007838397.1 rubredoxin -
  ACHMXE_RS15725 (ACHMXE_15740) pilG 734261..734659 (+) 399 WP_057590817.1 PleD family two-component system response regulator Regulator
  ACHMXE_RS15730 (ACHMXE_15745) - 734660..735025 (+) 366 WP_057590818.1 PleD family two-component system response regulator -
  ACHMXE_RS15735 (ACHMXE_15750) - 735045..735578 (+) 534 WP_203202917.1 chemotaxis protein CheW -
  ACHMXE_RS15740 (ACHMXE_15755) - 735625..737952 (+) 2328 WP_203202916.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14680.84 Da        Isoelectric Point: 7.9041

>NTDB_id=1064770 ACHMXE_RS15725 WP_057590817.1 734261..734659(+) (pilG) [Variovorax sp. UC122_21]
MGPNGSGYKVLVIDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALSKVNDHKPHLIFCDILMPRLDGYQTCAIIKRNAHFS
KVPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVQQFGNVSQEVQ

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1064770 ACHMXE_RS15725 WP_057590817.1 734261..734659(+) (pilG) [Variovorax sp. UC122_21]
ATGGGCCCGAATGGATCAGGTTACAAGGTGCTCGTCATCGACGACAGCAACACCATCCGGCGCAGTGCCGAGATTTTTCT
GAAGCAGGGTGGTCACGAGGTTCTCCTCGCCGAAGACGGCTTCGACGCGCTCTCCAAGGTTAACGACCACAAGCCGCACC
TGATTTTCTGCGACATCCTGATGCCGCGGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCCCATTTCTCC
AAGGTCCCGGTCGTGATGCTGTCGTCCAAGGACGGCGTGTTCGACAAGGCGCGCGGCCGCATGGTCGGATCGCAAGACTA
CCTGACCAAGCCTTTCACCAAAGACCAGCTGCTGCAGGCCGTGCAGCAGTTCGGCAACGTTTCACAGGAAGTGCAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2E9BVN5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

61.404

86.364

0.53

Multiple sequence alignment