Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACHMXC_RS13075 Genome accession   NZ_CP171997
Coordinates   2831345..2831743 (+) Length   132 a.a.
NCBI ID   WP_005796099.1    Uniprot ID   J1EM23
Organism   Acidovorax delafieldii strain UC81_30     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2826345..2836743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHMXC_RS13050 (ACHMXC_13045) pobA 2826440..2827624 (-) 1185 WP_395453019.1 4-hydroxybenzoate 3-monooxygenase -
  ACHMXC_RS13055 (ACHMXC_13050) - 2827885..2828664 (+) 780 WP_056066242.1 IclR family transcriptional regulator C-terminal domain-containing protein -
  ACHMXC_RS13060 (ACHMXC_13055) hemL 2828765..2830075 (-) 1311 WP_395453021.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ACHMXC_RS13065 (ACHMXC_13060) - 2830059..2830985 (-) 927 WP_395458185.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  ACHMXC_RS13070 (ACHMXC_13065) - 2831133..2831285 (+) 153 WP_165836572.1 rubredoxin -
  ACHMXC_RS13075 (ACHMXC_13070) pilG 2831345..2831743 (+) 399 WP_005796099.1 PleD family two-component system response regulator Regulator
  ACHMXC_RS13080 (ACHMXC_13075) - 2831743..2832108 (+) 366 WP_005796104.1 PleD family two-component system response regulator -
  ACHMXC_RS13085 (ACHMXC_13080) - 2832124..2832651 (+) 528 WP_056066233.1 chemotaxis protein CheW -
  ACHMXC_RS13090 (ACHMXC_13085) - 2832673..2834961 (+) 2289 WP_056746880.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14612.79 Da        Isoelectric Point: 6.9234

>NTDB_id=1064758 ACHMXC_RS13075 WP_005796099.1 2831345..2831743(+) (pilG) [Acidovorax delafieldii strain UC81_30]
MTTTGASFKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
DTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNSQQGAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1064758 ACHMXC_RS13075 WP_005796099.1 2831345..2831743(+) (pilG) [Acidovorax delafieldii strain UC81_30]
TTGACTACAACAGGCGCATCTTTCAAAGTGCTCGTGGTGGATGACAGCAACACCATCCGTCGAAGCGCCGAGATTTTTCT
CAAGCAGGGGGGGCACGAAGTCTTGTTGGCCGACGACGGCTTTGATGCTTTGGCCAAAGTCAACGATTACCAGCCTCAGC
TGATTTTCTGCGACATCCTCATGCCCAAGCTCGACGGGTACCAGACCTGCGCCATCATCAAGCGCAACGCCCGTTTCGCA
GATACCCCGGTGGTGATGCTGTCCTCCAAGGACGGCGTGTTCGACAAGGCGCGTGGGCGCATGGTCGGCTGCCAGGAATA
TCTCACCAAGCCGTTTACCAAAGACCAGCTGTTGCAGGCAGTGCAGCAGTTTGGCAATTCCCAACAAGGAGCCATGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J1EM23

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.198

91.667

0.515

Multiple sequence alignment