Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACHMW6_RS30110 Genome accession   NZ_CP171977
Coordinates   6046969..6047367 (-) Length   132 a.a.
NCBI ID   WP_395402554.1    Uniprot ID   -
Organism   Pseudoduganella sp. UC29_106     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6041969..6052367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHMW6_RS30095 (ACHMW6_30090) - 6043693..6045990 (-) 2298 WP_395402548.1 methyl-accepting chemotaxis protein -
  ACHMW6_RS30100 (ACHMW6_30095) - 6046043..6046594 (-) 552 WP_395402550.1 chemotaxis protein CheW -
  ACHMW6_RS30105 (ACHMW6_30100) - 6046598..6046963 (-) 366 WP_395402552.1 response regulator transcription factor -
  ACHMW6_RS30110 (ACHMW6_30105) pilG 6046969..6047367 (-) 399 WP_395402554.1 PleD family two-component system response regulator Regulator
  ACHMW6_RS30115 (ACHMW6_30110) - 6047516..6047668 (-) 153 WP_028104578.1 rubredoxin -
  ACHMW6_RS30120 (ACHMW6_30115) - 6047764..6048579 (+) 816 WP_395402556.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  ACHMW6_RS30125 (ACHMW6_30120) hemL 6048587..6049873 (+) 1287 WP_395402558.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ACHMW6_RS30130 (ACHMW6_30125) - 6049896..6050450 (-) 555 WP_395402560.1 sensor histidine kinase -
  ACHMW6_RS30135 (ACHMW6_30130) - 6050464..6050988 (-) 525 WP_395402562.1 hypothetical protein -
  ACHMW6_RS30140 (ACHMW6_30135) corA 6051089..6052054 (-) 966 WP_395402564.1 magnesium/cobalt transporter CorA -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14186.39 Da        Isoelectric Point: 7.9055

>NTDB_id=1064700 ACHMW6_RS30110 WP_395402554.1 6046969..6047367(-) (pilG) [Pseudoduganella sp. UC29_106]
MTTTPQANGLKIMVIDDSSTIRRSAEIFLTQAGYQVVLAEDGFDALAKINDHHPSLIFCDILMPRLDGYQTCALIKKSAK
FHATPVLMLSSKDGLFDRARGAMVGSSAYLTKPFTKDSLLAAVREHAAGAGA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1064700 ACHMW6_RS30110 WP_395402554.1 6046969..6047367(-) (pilG) [Pseudoduganella sp. UC29_106]
ATGACGACTACGCCGCAAGCGAATGGTTTGAAAATCATGGTGATCGACGACAGCAGCACCATTCGTCGATCCGCTGAAAT
CTTCCTGACCCAGGCCGGTTATCAGGTGGTATTGGCCGAAGATGGCTTCGATGCCCTGGCCAAGATCAACGACCACCATC
CCTCCCTGATCTTCTGCGATATCCTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCCTGATCAAGAAGAGCGCCAAG
TTCCACGCCACCCCGGTATTGATGCTTTCATCCAAGGACGGCCTGTTCGACCGCGCCCGCGGCGCCATGGTCGGCTCGTC
CGCCTACCTGACCAAACCCTTCACGAAAGACAGCCTGCTGGCCGCGGTGCGCGAGCATGCCGCCGGCGCGGGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

61.667

90.909

0.561

Multiple sequence alignment